Gene Bcenmc03_5202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5202 
Symbol 
ID6128013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2297511 
End bp2298044 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content64% 
IMG OID641652293 
Product4-vinyl reductase 4VR 
Protein accessionYP_001778821 
Protein GI170737561 
COG category[R] General function prediction only 
COG ID[COG1719] Predicted hydrocarbon binding protein (contains V4R domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCGC AACTGCCGAT CAACGTCGAT CCCGATACCG GCGTCTGGAC CACCGACGCG 
CTGCCGATGC TGTACGTGCC GCGCCACTTC TTCACGAACA ACCACGTCGC CGTCGAGGAA
GCGCTCGGCG TCGAAGCGTA TGCCGAGATC CTCTACAAGG CCGGCTACAA ATCCGCTTAC
CACTGGTGCG ACAAGGAAGC GAAGCAGCAC GGCATCACCG GCATGGCCGT GTTCGAGCAC
TACCTGAAGC GCCTGTCGCA ACGCGGCTGG GGCCTGTTCT CGATCATCGA GGCCGATCCG
GCGAGCGCAC GCGCGAAGAT CGAGCTGCGC CACTCGTCGT TCGTGCTCCA GCAGCCGGGC
AAGGAAGGCA AGCTCTGCTA CATGTTCGCG GGCTGGTTCG CGGGCGCGAT GGACTGGGTC
AACGACACGA CGCCGGAAGG CAAGGGTGCA CCGCGCGCGT ACTCGAAGGA AGTGCAGTGC
GCGGCCGAGC ATCACGACCA CTGCGTCTTC GAAGTGTCGC CGATCGCGCA CTGA
 
Protein sequence
MQPQLPINVD PDTGVWTTDA LPMLYVPRHF FTNNHVAVEE ALGVEAYAEI LYKAGYKSAY 
HWCDKEAKQH GITGMAVFEH YLKRLSQRGW GLFSIIEADP ASARAKIELR HSSFVLQQPG
KEGKLCYMFA GWFAGAMDWV NDTTPEGKGA PRAYSKEVQC AAEHHDHCVF EVSPIAH