Gene Bcenmc03_5199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5199 
Symbol 
ID6128010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2293617 
End bp2294642 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content67% 
IMG OID641652290 
ProductAraC family transcriptional regulator 
Protein accessionYP_001778818 
Protein GI170737558 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCCG ACCGCACAGC GTCGCTGTCC CACTTCGCGT TCATGCCGTT ACCGAACTTC 
ACGATGATCG CGTTCACCAA TGCGATCGAG GTGCTTCGGA TGGCGAACTA CCTGAGCGGC
CAGCCGCTCT ACCGCTGGTC GGTGATCAGC CCGGACGGCG GTCCGGTCAC GGCGAGCAAC
GGTCTCACGG TCGACACCGG CCCGGCCGAA TGCGCGGGGC AGCCCGACAT CGTGTTCGTG
TGCGGCGGCG TCGACGTACA GCGCGCGACC ACGCCCGCCC ATCTGTCGAC CCTGCGCCGC
TTCGCGCGTT CGGGCATCCC GCTCGGCAGC CTGTGCACGG GCACCTATGC ACTCGCGAAA
TCGGGGCTGC TCGCGGGCTA CGCGTGCGCG ATCCACTGGG AGAACATGTC GGCGCTGAAG
GAAGAGTTTC CGGACACGCG CTTCCTGAAG GAACTGTTCG TGATCGATCG CGACCGCATC
ACGTGCACGG GCGGCGTCGC ACCGCTCGAC ATGATGCTGA ACCTGATCGC CGCGCGCGTC
GGTACCGCGC GCGTCACGCA GATTGCCGAG CAGTTCATCG TCGAACACGT ACGCGACACG
AGCGCGCAGC AGCGCATGCC GCTCGTCGCG CGTCTAGGCT CGGCGAACAA GTCGCTGTTC
GAAGTGATTT CGCTGATGGA GAACAACATC GAGGAGCCGC TGTCGCGCGA GGAACTCGCG
CGGCTCGCGA ACATGTCGCA GCGGCAATTG CAGCGCCTGT TCCGCGAGCA TCTCGGGATG
ACGCCGACGC ACTACTACCT GACGCTGCGG CTGCGCCGTG CGCGCGAGTT GCTGCTGCAG
ACCGACATGT CGATCATGCA CATCACGATG GCGTGCGGCT TCCAGTCGGC ATGCCACTTC
AGCAAGAGCT ATCGCGATGC GTTCGGCGTC GCGCCGACGC GTGAGCGCCG CAAGCAGGTC
GCGCCGCTCG CGCAGGGTGC GGCGAGTGCG GGGCCGGCGT TTCCGGCGCG TGTGCTGCAT
GCGTGA
 
Protein sequence
MSPDRTASLS HFAFMPLPNF TMIAFTNAIE VLRMANYLSG QPLYRWSVIS PDGGPVTASN 
GLTVDTGPAE CAGQPDIVFV CGGVDVQRAT TPAHLSTLRR FARSGIPLGS LCTGTYALAK
SGLLAGYACA IHWENMSALK EEFPDTRFLK ELFVIDRDRI TCTGGVAPLD MMLNLIAARV
GTARVTQIAE QFIVEHVRDT SAQQRMPLVA RLGSANKSLF EVISLMENNI EEPLSREELA
RLANMSQRQL QRLFREHLGM TPTHYYLTLR LRRARELLLQ TDMSIMHITM ACGFQSACHF
SKSYRDAFGV APTRERRKQV APLAQGAASA GPAFPARVLH A