| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5191 |
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| Symbol | |
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| ID | 6128002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2283941 |
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| End bp | 2285131 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641652282 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001778810 |
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| Protein GI | 170737550 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.356759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCACG ACAACCTCCA TTCCGCCGCG CCGCCGGCCG CACTGAACGA CCCGGCGCTC
GACGCGCGCC GCGCGACGCG CCGCAAGCGC TTCACCGTGT TCTTCGCGAT CGTGCTGCTG
GCCGCGATCG CATGGATCGC CTACTGGCTG CTGAGCGACC GCTATTACGA AGACACCGAT
GACGCGTACG TCGCGGGCAG CATCGTGCAG GTCGCCGCGC AGATCCCGGG CGCCGTGACC
GACGTGGTGG TCGCCGATAC GCAAGCCGTG CGCGCCGGGC AGCCGCTCGT GCGGCTCGAC
GACACCGAGG CATCCGTCGC GTTCGCGCAG GCGAAGGCGC AGCTCGCGCA GGCCGTGCGC
CAGGTCGCGA ACGCGAGGAT CTCGAACACG ATGTACGTCG AGGCCGTGAA TGCGCGCCGC
GCCGACCTGT CGCTGGCGCA GCGCGCGCTC GCCGCGCGCT CGGGCGCATC GGTCGAGATC
GTCGCACCTG AAGAACTGGC GCGGGCGCGC GCGGCGGTGG CCGGCGCGCA GGCGAACCTC
GCGGCCGCGC AGGCGCAGCT CGACGCGGCG CGCGCGCTCG GCAGCAAGCT GCCCGTTGAC
GAAAGCCCGG CGGTCGTGCA GGCGGCCGCG CAGTTCAAGC TCGCGTACCG GAACCTGAAG
CGCACGACGA TCGTCGCGCC CGTCGACGGC ACGATCGGGC AGCGCTCGGT GCAGGTCGGC
CAGCAGGTCG GGCCCGGCGT GCCGCTGATG TCGATCGTGC AGCTCAACCG GCTGTGGGTC
GAGGCGAATT TCAAGGAAGG GCAGATTCGT CACATGCGCG TCGGGCAGCC GGTCGAGGTC
GTGTCGGATC TGTACGGCTC GCGCATCGCC TATCGCGGCC GTGTGCAGGG CTTCTCGGCC
GGCACGGGCA GCGCGTTCTC GATGCTGCCG TCGCAGAACG CGGCCGGCAA CTGGATCAAG
GTCGTGCAGC GCGTGCCGGT GGTGATCGCG CTCGATCCGC GCGACGTCGC CGCGCATCCG
CTGCGCGTCG GGCTGTCGAT GCGCGCGACG GTCGACACGC ACGACCGCAA CGGCCACGCG
CTCGACAGCG AACCGCCGAC GCCGGCCGTC AGCACGCGCG TGCACGACGG CGTCGCGAGC
GACGCGGAAG CGGCCGCCGC CGCGATCATC CGCGAGAATC AGGGCGGGTA A
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| Protein sequence | MHHDNLHSAA PPAALNDPAL DARRATRRKR FTVFFAIVLL AAIAWIAYWL LSDRYYEDTD
DAYVAGSIVQ VAAQIPGAVT DVVVADTQAV RAGQPLVRLD DTEASVAFAQ AKAQLAQAVR
QVANARISNT MYVEAVNARR ADLSLAQRAL AARSGASVEI VAPEELARAR AAVAGAQANL
AAAQAQLDAA RALGSKLPVD ESPAVVQAAA QFKLAYRNLK RTTIVAPVDG TIGQRSVQVG
QQVGPGVPLM SIVQLNRLWV EANFKEGQIR HMRVGQPVEV VSDLYGSRIA YRGRVQGFSA
GTGSAFSMLP SQNAAGNWIK VVQRVPVVIA LDPRDVAAHP LRVGLSMRAT VDTHDRNGHA
LDSEPPTPAV STRVHDGVAS DAEAAAAAII RENQGG
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