| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5190 |
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| Symbol | |
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| ID | 6128001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2282085 |
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| End bp | 2283941 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641652281 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001778809 |
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| Protein GI | 170737549 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.175856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAAAG CGGCGGGTTC GGCGCGTGGC GTGAAGGGCG GCTCGATGAT CGCGACGCTC
GCTGCATTGC TCGCATTGGG CGGATGCGTG CCGTCGGGCT TCCTGCCGTC GCTGTCGCTG
CGTGCGCCGG CCGACGATGC GCTCGCGCAT ACCGCCGGCC CGGGCGCGAA CGGCGCATGG
CCGGCGCCCG ACTGGGTGAA GCAGTTGCAG GACCCGCAGC TCGACGACCT GGTCGCCGAG
GCGTCGCAGC ACAACCCCGA TCTGCAGGTC GCGCAGGCGC GGTTGCGGAT CGCGCAGGCG
CAGCTTCAGC AGTTCGATTC GCTGACCGGT TTGACGGGCA CGGCCGGCGC GACGATCAGC
CGGGCACGGA TGCCGAAGCC CGGTGACATC GCCGACGTCA CGGCTGGCGG CTATCGCGTG
CCGGTGCAGA TTTTCGGCGA TCCGAACGTG TCGCCGTCGT CGATCTTCGT CGGGTTGAAC
TACCAGCTCG ACCTGTGGGG CAGGAACCGC GCGGCGACGA AGAGCCTGAT GTCGCTGCGC
GACGCGGCCG GCGTCGAGGC CGAGCAGGTG CGGCTCACGC TCGCCGTCGC GATCGTCACC
GTGTATTGCC AGCTCGACCA GGCGTACGCG GTGCGCGACC TGTTGCAGCA GAAGCTGAAG
ATCAGCCAGC GCGTGACGGC CGTGCTGCGC GAGCGCACCG CGCGCGGCCT CGACAACGCG
TACGACGCGA GCGATGCGTC GATCAAGCGC AGCCGCCTGC TCGAGCAGAT CGCGCTGAAC
GACGAGCAGA TCAAGCTCGC GCAACTGCAA CTCGGCGTGC TGTCGGGCCG CGGTCCGGAG
CGCGGGCTCG CGCTGCAGCG GCCGCGCGTC GGCGCGTTCG CGGGCGGCGC CGTGCCGGCC
CGGCTGCCGG CCGATCTGCT CGGCCGCCGG CCCGACATCG TCGCCGCGCG GCTGCGGGTT
GAGGCCGCGT TCGCGAATGC CGACTCGACG CGTGCGCAGT TCTATCCGGA CGTGAATCTC
GTCGCACTCG GCGGTGTGTT CGCACTCACG CCCGCGTCGC TGTTCTCGCG CGATTCGCTC
GCGGGCTCCG TCGGCCCCGC GATCTCGCTG CCGATCTTCG ATCGCGGCCG GCTGAAGGCG
AAGCTCGGCG CGGACGTTGC GCAGGCCGAC GTCGCGATCG GGCTGTACAA CAAGACCGTC
GACGACGCGC TCGGGCAGGT CGCGCAACTC GTCACGTCGC TGCAGACGTC GCAGACGCTC
GTCGCGCAGC AGCAGGATGC GGTCGCGGCC GCGCAGAAGA TCGTGCAGAT CGCGGCGGAT
CGGCATCGGC GCGGCGTGCT GATGCAGAAG GACGTCGATG TCGCGGATCT CACGCTGATC
GACGAGCGCG CGCAGATGAT CGCGCTGCTC GGCAAGCAGC GGACGCTGCG GGTGGGGCTG
ATCGGCGCGC TGGGCGGCGG GTTCGATGCG GGCGCAACGG TCGCGCAAGC GCAGACGCCG
GCCGGGCAGC GGGCGCGGAG TGGGGCGACG AGGCGCGGGG CGGCAACGGC CGTGGCTGCC
GTGGGCGCCG TTGCCGCGAA TCGGGCGATG GCTGGTCCGA CGAACGATGC ACGCGCAGGC
AGCACGGCCG TGTCGGCGGC TCCTGCCGCG ACGAGCAACG CGCCCGCGTC TGCATCGGCA
CGACGCGACG ACACCGCGCG CCCGTCGACG ATCGGTGCGA CCCGCCCCGA CGCAACGCCG
CGCGGCGCGC CCGTTCTCGC GCGCACGGCC TCGGTGAGCC CGACGCGCGA TTCGTCGCCG
ATGCCCGCGA TTCCCGTCTT CCAGCACGAT CGTCTGATCG TTACGCAAAG CGACTGA
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| Protein sequence | MRKAAGSARG VKGGSMIATL AALLALGGCV PSGFLPSLSL RAPADDALAH TAGPGANGAW
PAPDWVKQLQ DPQLDDLVAE ASQHNPDLQV AQARLRIAQA QLQQFDSLTG LTGTAGATIS
RARMPKPGDI ADVTAGGYRV PVQIFGDPNV SPSSIFVGLN YQLDLWGRNR AATKSLMSLR
DAAGVEAEQV RLTLAVAIVT VYCQLDQAYA VRDLLQQKLK ISQRVTAVLR ERTARGLDNA
YDASDASIKR SRLLEQIALN DEQIKLAQLQ LGVLSGRGPE RGLALQRPRV GAFAGGAVPA
RLPADLLGRR PDIVAARLRV EAAFANADST RAQFYPDVNL VALGGVFALT PASLFSRDSL
AGSVGPAISL PIFDRGRLKA KLGADVAQAD VAIGLYNKTV DDALGQVAQL VTSLQTSQTL
VAQQQDAVAA AQKIVQIAAD RHRRGVLMQK DVDVADLTLI DERAQMIALL GKQRTLRVGL
IGALGGGFDA GATVAQAQTP AGQRARSGAT RRGAATAVAA VGAVAANRAM AGPTNDARAG
STAVSAAPAA TSNAPASASA RRDDTARPST IGATRPDATP RGAPVLARTA SVSPTRDSSP
MPAIPVFQHD RLIVTQSD
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