| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5182 |
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| Symbol | |
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| ID | 6127993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 2272158 |
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| End bp | 2273858 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641652273 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_001778801 |
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| Protein GI | 170737541 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.222705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAC GCGAATACGA CTACATCATC TGCGGCGCGG GTTCCGCGGG CAACGTGCTC
GCAACGCGCC TGACGGAAGA TCCGGACGTC ACGGTGCTGC TGCTCGAAGC GGGCGGCCCC
GACTACCGCT TCGACTTCCG CACGCAGATG CCGGCGGCGC TGGCCTATCC GCTGCAGGGC
CGCCGCTACA ACTGGGCGTA CGAGACCGAT CCCGAGCCGC ACATGGACAA CCGCCGGATG
GAATGCGGGC GCGGCAAGGG GCTCGGCGGC TCGTCGCTGA TCAACGGGAT GTGCTACATC
CGCGGCAACG CGCTCGACTA CGACAACTGG TCGACGCACA AGGGCCTCGA GAACTGGACG
TATCTCGACT GCCTGCCGTA CTTCAAGAAA GCCGAGACGC GCGACGTCGG CCCGAACGAC
TATCACGGCG GCAGCGGCCC CGTGTCGGTC ACGACCAGCA AGCCGGGCGT GAATCCGCTG
TTCGAGGCGA TGGTCGACGC GGGTGTGCAG GCCGGCTATC CGCGCACTGA TGACCTCAAC
GGTTATCAGC AGGAGGGCTT CGGCCCGATG GACCGCACCG TCACGCCGAA GGGCCGCCGC
GCGAGCACCG CGCGCGGCTA CCTCGACCAG GCAAAGGTGC GGCCGAACCT CGAGATCGTC
ACGCACGCGC TCGCCGACCG CATCCTGTTC GACGGCAAGC GCGCGTCGGG CGTGACCTAC
CTGCGCGGCA GCGAGCGCGC GACCGCGCAT GCGCGCCGCG AAGTGCTCGT ATGCAGCGGC
GCGATCGCGT CGCCGCAACT GCTGCAGCGC TCGGGTGTCG GCCCCGGCGC ATGGCTGAAA
GAACTCGACA TTCCGGTCGT GCTCGATCTG CCCGGCGTCG GCCAGAACCT GCAGGATCAC
CTGGAGATGT ACATCCAGTA CGAGTGCAAG GAACCGGTCT CGCTGTACCC GGCGCTCAAG
TGGTGGAATC AGCCGAAGAT CGGCCTCGAA TGGATGCTGA ACGGCACGGG CCTCGGCGCG
AGCAACCACT TCGAGGCGGG CGGCTTCATC CGCACGCGCG ACGACGACCC GTGGCCGAAC
ATCCAGTATC ACTTCCTGCC GGTGGCGATC AACTACAACG GCTCGAACGC GATCGAAATG
CATGGCTTCC AGGCGCACGT CGGCTCGATG CGCTCGCCGA GCCGCGGCCG CGTGAAGCTG
CGCTCGCGCG ATCCGAACGA CCATCCGAGC ATCCTGTTCA ACTACATGGC CGAAGCGCTC
GACTGGCGCG AGTTCCGCGA TGCGATCCGC GCGACGCGCG AGATCATGCG GCAGCCGGCG
CTCGACCGCT ATCGCGGCCG CGAGCTGAAT CCGGGCGCCG ACTGCAAGAG CGACAAGGAA
CTCGACGCGT TCGTGCGGGC GCGCGCGGAA ACCGCGTTCC ATCCGTCGTG CTCGTGCAAG
ATGGGCTACG ACGACATGGC GGTGGTCGAT GAAGAAGGCC GCGTGCACGG GCTCGACGGG
CTGCGCGTCG TCGATGCGTC GATCATGCCG ATCATCACGA CCGGCAACCT GAATGCGCCG
ACGATCATGA TCGCCGAGAA GATCGCCGAC AAGATCCGCG GCCGCCAGCC GCTCGCGCGG
GTCGACGTGC CGTACTTCGT CGCGAACGGC GCACCGGCGC GCAATGTGGC GAAGGCCGTG
CGGCAACCCG AGACGGTCTG A
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| Protein sequence | MTTREYDYII CGAGSAGNVL ATRLTEDPDV TVLLLEAGGP DYRFDFRTQM PAALAYPLQG
RRYNWAYETD PEPHMDNRRM ECGRGKGLGG SSLINGMCYI RGNALDYDNW STHKGLENWT
YLDCLPYFKK AETRDVGPND YHGGSGPVSV TTSKPGVNPL FEAMVDAGVQ AGYPRTDDLN
GYQQEGFGPM DRTVTPKGRR ASTARGYLDQ AKVRPNLEIV THALADRILF DGKRASGVTY
LRGSERATAH ARREVLVCSG AIASPQLLQR SGVGPGAWLK ELDIPVVLDL PGVGQNLQDH
LEMYIQYECK EPVSLYPALK WWNQPKIGLE WMLNGTGLGA SNHFEAGGFI RTRDDDPWPN
IQYHFLPVAI NYNGSNAIEM HGFQAHVGSM RSPSRGRVKL RSRDPNDHPS ILFNYMAEAL
DWREFRDAIR ATREIMRQPA LDRYRGRELN PGADCKSDKE LDAFVRARAE TAFHPSCSCK
MGYDDMAVVD EEGRVHGLDG LRVVDASIMP IITTGNLNAP TIMIAEKIAD KIRGRQPLAR
VDVPYFVANG APARNVAKAV RQPETV
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