Gene Bcenmc03_5174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5174 
Symbol 
ID6127985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2263848 
End bp2264792 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content67% 
IMG OID641652265 
ProductABC transporter related 
Protein accessionYP_001778793 
Protein GI170737533 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.179652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCGA TCCTTTCCGT CTCCGACCTC TCCAAGACTT ACGCGTCCGG CTTCCAGGCG 
CTGAAGCACG TGACCCTCGA CATCCGCCCC GGCGAGATCT TCGCGCTGCT CGGGCCGAAC
GGCGCCGGCA AGACGACGCT GATCGGCTCG ATCTGCGGCA TCGTCACGCC GACCGAAGGC
CGCGTGACGG TCGGCGGCCA CGATATTCGC GATCAATACC GCGCCGCCCG CGAAATGATC
GGCCTCGTGC CGCAGGAGCT GACCACCGAC GCGTTCGAAA CCGTCTGGGC GACCGTGTCG
TTCAGCCGCG GCCTGTTCGG CAAGGCGCCC GATCCCGCGT ACATCGAGAA AACGCTGAAG
GCGCTGTCGC TGTGGGACAA GCGCGACAAC AAGCTGATGA CGCTGTCGGG CGGCATGAAG
CGCCGCGTGA TGATCGCGAA GGCGCTGTCG CACGAGCCGC GCATCCTGTT CCTCGACGAG
CCGACGGCCG GGGTCGACGT CGAGCTGCGC CGCGACATGT GGAAGCTCGT CGATTCGCTG
CGCGAAAGCG GCGTGACGAT CCTGCTGACC ACGCACTACA TCGAGGAAGC CGAGGAGATG
GCCGACCGGA TCGGCATCAT CCTCGGCGGC GAGCTCGTGC TCGTCGAGGA AAAGCGCGAA
CTGATGCGCA AGCTCGGCAA GAAGCAGCTC ACCGTGCAGC TCGAGCACCC GCTCGCGGAC
GTGCCGCCCG CGCTCGCGCC GTTCGGGCTC GAACGCGCGG AAGACGGCGC CGCGCTCGTC
TATACGTACG ACTCGCAGCG CGACGACGCG AGCATCGCGA AGCTCATCAA CGCGCTCGGC
TCGGCCGGCA TCGGCTTTCG CGACCTGCAC ACGACGCAGA GCTCGCTGGA GGACATTTTC
GTCAGCCTGA TCGACAACCG CCGCAACGGC GTGCAAGGAG CCTGA
 
Protein sequence
MQPILSVSDL SKTYASGFQA LKHVTLDIRP GEIFALLGPN GAGKTTLIGS ICGIVTPTEG 
RVTVGGHDIR DQYRAAREMI GLVPQELTTD AFETVWATVS FSRGLFGKAP DPAYIEKTLK
ALSLWDKRDN KLMTLSGGMK RRVMIAKALS HEPRILFLDE PTAGVDVELR RDMWKLVDSL
RESGVTILLT THYIEEAEEM ADRIGIILGG ELVLVEEKRE LMRKLGKKQL TVQLEHPLAD
VPPALAPFGL ERAEDGAALV YTYDSQRDDA SIAKLINALG SAGIGFRDLH TTQSSLEDIF
VSLIDNRRNG VQGA