Gene Bcenmc03_5172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5172 
Symbol 
ID6127983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2261497 
End bp2262921 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content70% 
IMG OID641652263 
Productmajor facilitator transporter 
Protein accessionYP_001778791 
Protein GI170737531 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0809503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCG CCACCGCTCC CGCCTCCGCC GCCGCCCGGC TCGAACGCCT GCCGTTCTCC 
GGTTATCACA AGCGCATCTT CTTCATCATC GCGATCGCGT TCTTCTTCGA CTCGGTCGAT
CTCGGCACGA TGACGTTCGT GCTCGGCTCG ATCCGCAAGG AGTTCGGGCT GTCGACCGCG
GCCGCCGGCC TCGTCGCGAG CGCGAGCTTC TTCGGGATGG TGCTGGGCGC GGCGGTAGCC
GGCCTGCTCG CCGACCGTTT CGGCCGCCGG CCCGTGTTCC AGTGGAGCAT GGTGCTGTGG
GGCGCCGCGT CGTACCTGTG CTCGACCGCG CAGAGCGTCG ACGCGCTGAT CGTCTACCGC
GTGCTGCTCG GCATCGGGAT GGGGATGGAG TTTCCGGTCG CGCAGACGCT GCTGTCCGAA
TTCGTGCCGA CCGAGAAGCG CGGCCGCCTG ATCGCGCTGA TGGACGGCTT CTGGCCGCTC
GGCTTCATCA CGGCCGGCAT CGTCGCGTAT TTCGTGCTGC CGCAGTTCGG CTGGCGCACC
GTGTTCGCGC TGCTCGCGAT TCCGGCCGTG TTCGTGCTCG TCGTGCGCCG CATCGTGCCG
GAATCGCCGC GCTGGCTCGA ACATGCTGGC CGGCACGCGG AAGCCGACAC GGTGATGCAC
ACGATCGAGG CGAAGGTGAT GCGCTCGGCC GGCGTCACGA CGCTGCCGCC GCCGTCGCGG
CTCGCCGAAC CGGCCGCCGC GCGCGGCCGC GGCGCGCTGC GCGAGATCTG GAGCGGCGTG
TACCGCCGCC GCACGGTGAT GGTGTGGCTG CTGTGGTTCT TCGCGCTGCT CGGCTTCTAC
GGCCTCACGT CGTGGCTCGG CGCGCTGCTG CAGCAGGCCG GCTTCGAAGT CACGAAATCG
GTGTTCTACA CGGTGCTGAT CTCGCTCGGC GGCGTGCCGG GCTTCCTGTG CGCCGCGTGG
CTCGTCGAAC GCTGGGGCCG CAAGCCGACC TGCATCGCAT CGCTGATCGG CGGCGGCGCG
ATGGCGTACG CGTACGGCCA GAGCGCGCTG TACGGCGGCA GCACGACGCT GCTGATCGTC
ACGGGCCTCG CGATGCAGTT CTTCCTGTTC GGGATGTGGG CGGCACTGTA CACGTACACG
CCCGAGCTGT ACGGCACCGG GGCGCGTGCG ACCGGCTCGG GCTTCGCGTC GGCGATCGGC
CGGATCGGCT CGCTGATCGG GCCTTACGTG GTCGGCGTCG TGTTGCCGGT GTTCGGCCAG
GGCGGCGTGT TCACGCTCGG CGCGCTGTCG TTCATCGCGG CGGCGATCGC CGTGTGGACG
CTGGGGATCG AGACGAAGGG CCTCGCGCTG GAGCAACTGG CGGCAGGCGA CGAAGCGGGC
GGCGGCGGAC GGTATCCGGC GCCGGCAGCG GACGAGGCGT CCTGA
 
Protein sequence
MPAATAPASA AARLERLPFS GYHKRIFFII AIAFFFDSVD LGTMTFVLGS IRKEFGLSTA 
AAGLVASASF FGMVLGAAVA GLLADRFGRR PVFQWSMVLW GAASYLCSTA QSVDALIVYR
VLLGIGMGME FPVAQTLLSE FVPTEKRGRL IALMDGFWPL GFITAGIVAY FVLPQFGWRT
VFALLAIPAV FVLVVRRIVP ESPRWLEHAG RHAEADTVMH TIEAKVMRSA GVTTLPPPSR
LAEPAAARGR GALREIWSGV YRRRTVMVWL LWFFALLGFY GLTSWLGALL QQAGFEVTKS
VFYTVLISLG GVPGFLCAAW LVERWGRKPT CIASLIGGGA MAYAYGQSAL YGGSTTLLIV
TGLAMQFFLF GMWAALYTYT PELYGTGARA TGSGFASAIG RIGSLIGPYV VGVVLPVFGQ
GGVFTLGALS FIAAAIAVWT LGIETKGLAL EQLAAGDEAG GGGRYPAPAA DEAS