Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5172 |
Symbol | |
ID | 6127983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 2261497 |
End bp | 2262921 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641652263 |
Product | major facilitator transporter |
Protein accession | YP_001778791 |
Protein GI | 170737531 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0809503 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGCCG CCACCGCTCC CGCCTCCGCC GCCGCCCGGC TCGAACGCCT GCCGTTCTCC GGTTATCACA AGCGCATCTT CTTCATCATC GCGATCGCGT TCTTCTTCGA CTCGGTCGAT CTCGGCACGA TGACGTTCGT GCTCGGCTCG ATCCGCAAGG AGTTCGGGCT GTCGACCGCG GCCGCCGGCC TCGTCGCGAG CGCGAGCTTC TTCGGGATGG TGCTGGGCGC GGCGGTAGCC GGCCTGCTCG CCGACCGTTT CGGCCGCCGG CCCGTGTTCC AGTGGAGCAT GGTGCTGTGG GGCGCCGCGT CGTACCTGTG CTCGACCGCG CAGAGCGTCG ACGCGCTGAT CGTCTACCGC GTGCTGCTCG GCATCGGGAT GGGGATGGAG TTTCCGGTCG CGCAGACGCT GCTGTCCGAA TTCGTGCCGA CCGAGAAGCG CGGCCGCCTG ATCGCGCTGA TGGACGGCTT CTGGCCGCTC GGCTTCATCA CGGCCGGCAT CGTCGCGTAT TTCGTGCTGC CGCAGTTCGG CTGGCGCACC GTGTTCGCGC TGCTCGCGAT TCCGGCCGTG TTCGTGCTCG TCGTGCGCCG CATCGTGCCG GAATCGCCGC GCTGGCTCGA ACATGCTGGC CGGCACGCGG AAGCCGACAC GGTGATGCAC ACGATCGAGG CGAAGGTGAT GCGCTCGGCC GGCGTCACGA CGCTGCCGCC GCCGTCGCGG CTCGCCGAAC CGGCCGCCGC GCGCGGCCGC GGCGCGCTGC GCGAGATCTG GAGCGGCGTG TACCGCCGCC GCACGGTGAT GGTGTGGCTG CTGTGGTTCT TCGCGCTGCT CGGCTTCTAC GGCCTCACGT CGTGGCTCGG CGCGCTGCTG CAGCAGGCCG GCTTCGAAGT CACGAAATCG GTGTTCTACA CGGTGCTGAT CTCGCTCGGC GGCGTGCCGG GCTTCCTGTG CGCCGCGTGG CTCGTCGAAC GCTGGGGCCG CAAGCCGACC TGCATCGCAT CGCTGATCGG CGGCGGCGCG ATGGCGTACG CGTACGGCCA GAGCGCGCTG TACGGCGGCA GCACGACGCT GCTGATCGTC ACGGGCCTCG CGATGCAGTT CTTCCTGTTC GGGATGTGGG CGGCACTGTA CACGTACACG CCCGAGCTGT ACGGCACCGG GGCGCGTGCG ACCGGCTCGG GCTTCGCGTC GGCGATCGGC CGGATCGGCT CGCTGATCGG GCCTTACGTG GTCGGCGTCG TGTTGCCGGT GTTCGGCCAG GGCGGCGTGT TCACGCTCGG CGCGCTGTCG TTCATCGCGG CGGCGATCGC CGTGTGGACG CTGGGGATCG AGACGAAGGG CCTCGCGCTG GAGCAACTGG CGGCAGGCGA CGAAGCGGGC GGCGGCGGAC GGTATCCGGC GCCGGCAGCG GACGAGGCGT CCTGA
|
Protein sequence | MPAATAPASA AARLERLPFS GYHKRIFFII AIAFFFDSVD LGTMTFVLGS IRKEFGLSTA AAGLVASASF FGMVLGAAVA GLLADRFGRR PVFQWSMVLW GAASYLCSTA QSVDALIVYR VLLGIGMGME FPVAQTLLSE FVPTEKRGRL IALMDGFWPL GFITAGIVAY FVLPQFGWRT VFALLAIPAV FVLVVRRIVP ESPRWLEHAG RHAEADTVMH TIEAKVMRSA GVTTLPPPSR LAEPAAARGR GALREIWSGV YRRRTVMVWL LWFFALLGFY GLTSWLGALL QQAGFEVTKS VFYTVLISLG GVPGFLCAAW LVERWGRKPT CIASLIGGGA MAYAYGQSAL YGGSTTLLIV TGLAMQFFLF GMWAALYTYT PELYGTGARA TGSGFASAIG RIGSLIGPYV VGVVLPVFGQ GGVFTLGALS FIAAAIAVWT LGIETKGLAL EQLAAGDEAG GGGRYPAPAA DEAS
|
| |