Gene Bcenmc03_5162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5162 
Symbol 
ID6127973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2252635 
End bp2253774 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content67% 
IMG OID641652253 
Productpyrroloquinoline quinone biosynthesis protein PqqE 
Protein accessionYP_001778781 
Protein GI170737521 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID[TIGR02109] coenzyme PQQ biosynthesis protein E 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.426022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCG ACACCCCCCG TCCGTCCGCG CCGCTGTGGC TGCTCGCGGA ACTCACGTAC 
CGCTGCCCGC TGCACTGCGC GTTCTGCTAC AACCCGGTCG ACTTCGCGAC GCACGGCGCG
GAACTCGACA CCGATGCGTG GCGCACGGTC ATCAGCGACG CGCGCGCGCT CGGCGCCGCG
CAGATCGGCT TCTCGGGCGG CGAGCCGCTG CAGCGCGGCG ACCTCGAGAC GCTCGTCGCG
CATGCGCGCG GGCTCGGCTT CTATACGAAC CTGATCACGT CGGGCATCGG GCTGAACGTC
GCGCGCATCG AGCGGCTCAA GGCCGCCGGG CTCGATCACA TCCAGTTGTC GCTGCAGGAT
TCGACGCGCG AGCTGAACGA TTTCCTGACC AGCACACGCA CGTTCGAACT GAAGCGCGAC
GTGGCGCGAC TGATCAAGGC GCACGGCTAT CCGATGGTGC TCAACTGCGT GCTGCATCGC
TACAACCTGC CGCACGTGGG GCAGATCATC GAGATGGCGC TCGATCTCGG CGCCGATTAC
CTGGAGCTCG CGAACACGCA GTACTACGGC TGGGCGATGC TCAATCGCGA CCAACTGATG
CCGACCGTCG AGCAGGTGCG CGAGGCGGAG GACACGGTCA ACCGCTATCG CAAGCTGATC
GGCGAGCGTT GCAAGATCCT GTTCGTCGTG CCCGACTATT TCGAGCGCCG CCCGAAGGCC
TGCATGAACG GCTGGGGCTC GGTGTTCCTC GGCGTCGCGC CGGACGGTAC CGCGCTGCCG
TGCCATGCCG CGCGGTCGCT GCCGGGGCTC GCGTTGCCGA ACGTGCGCGA CCGTTCACTG
CGGGACATCT GGTACGACAG CGACGCGTTC AACGCGTTTC GCGGCGACGA CTGGATGCGC
GAGCCGTGTC GCACGTGCGA CGAGCGGCAT GTAGATCACG GCGGTTGCCG GTGTCAGGCC
TATCTGCTGG CCGGCGACCC GCGGGAGGCC GACCCGGTGT GTGCGAAGTC CGCCCATCAC
GGTCAGGTCG AACAGGCCGT GCAGTTCGCG CGACGTCGTG CGCCGAGCGA CGAACAGCCG
CTGGTTTTTC GCAGCAAGGA GAATTCGCTC GCGCAATGCG GCGCGGCGTG CGATTGCTGA
 
Protein sequence
MTPDTPRPSA PLWLLAELTY RCPLHCAFCY NPVDFATHGA ELDTDAWRTV ISDARALGAA 
QIGFSGGEPL QRGDLETLVA HARGLGFYTN LITSGIGLNV ARIERLKAAG LDHIQLSLQD
STRELNDFLT STRTFELKRD VARLIKAHGY PMVLNCVLHR YNLPHVGQII EMALDLGADY
LELANTQYYG WAMLNRDQLM PTVEQVREAE DTVNRYRKLI GERCKILFVV PDYFERRPKA
CMNGWGSVFL GVAPDGTALP CHAARSLPGL ALPNVRDRSL RDIWYDSDAF NAFRGDDWMR
EPCRTCDERH VDHGGCRCQA YLLAGDPREA DPVCAKSAHH GQVEQAVQFA RRRAPSDEQP
LVFRSKENSL AQCGAACDC