Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5158 |
Symbol | |
ID | 6127969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 2248216 |
End bp | 2250258 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641652249 |
Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
Protein accession | YP_001778777 |
Protein GI | 170737517 |
COG category | [K] Transcription [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.493898 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGATG ACGTAGAGCA GGCGGCCGGG TCACGGGCCG CGCATCCCGC CGGCTGGCCC GCGCCGTCGA TCCAGAAGGC CCATGAGCGT TCGGAGACGT TCGGCCTGCA GGTATCGGCG CGGCCCGACT ACGACGTGCT GTCGAACGCG GCGCTGGTGC TCAAGCGCGA GCAGAGCCGG GTGCTGTGCG TGCACGCGAT GCCGGTGATG GAGACGCTGC ACGAGCAGAT CGTCAACACG CAGAGCATGA TCGTGCTGAC CGATGCGGAA GGGCTGATCC TGCATTCGAT CGGCGACGAC GATTTCCTGC GCCGCGCGGA GAAGGTCGCG CTGCGCCCCG GCGCGAACTG GGCGGAGAAC CGGCAGGGCA CCAACGCGAT CGGCACGGCG CTGGCCGAGC TGTGCCCGAT GGTCGTCCAC GGCGACCAGC ACTTCCTGGC CGCGAACCGC TTCCTGACCT GTTCGAGCGT GCCGATCCTC GATCCGTACG GCGACGCGAT CGGCGTGCTC GACGTGACGG GCGATCACCG CAGCTATCAC CAGCACACGA TGGCGCTCGC GAAGATGTCG GTGCAGATGA TCGAGAATCA TCTGTTTACG ACGACGTTTC AGGAAACGCT GCAGGTGTCG TTCCATGGCC GCCCCGAATT TCTCGGCACG CTGATGGAGG GGATCGTCGC GTTCACCGCC GATGGCCGCT TCCTGTCGGC CAATCGCAGC GCGCAGTTCC AGCTCGGCAT GCCGCTCGCC GCGCTGCGCG CGCACACGCT GTCGTCGCTG TTCGACGTCA CCAGCGCCCA GCTGATCGAC CGCATGCGCG CGAGCACCGA CCGGCACCTG ATGCTCAATC TCGGCAACGG CGCGGTGGTC TGCGCGCGCG TGCATTTTCG CCGCGCGACG CTCGCCGAAG GCAGCCGGCC GACGGACGTC CACGATGCAG GGGCGCCGGG CGCGCGCGCG AACGCGGTGC CCGCGCCGGC GGCGGGCACG TCGGCCGGCC TGTCGCGGCT CAACTATCTC GACACCGGCG ATGCGCAGGT CGCCAGCGTG ATCGCGAAGG TACGCAAGGT GATCGGCAAG GACATCCCGA TCCTGATCAC CGGCGAGACC GGCACCGGCA AGGAACTGCT CGCGCAGGCG ATCCACAACG ACTCGCCGCG CCGCGACGCG CCGTTCGTCG CGGTCAACTG CGCGTCGATT CCGGAGACGC TGATCGAGTC CGAGCTGTTC GGCTACGAGG AGGGCGCGTT TACCGGCGCG CGCCGCAAGG GGGCGATCGG CAAGCTGCTG CAGGCGAACG GCGGCACGCT GTTCCTCGAC GAGATCGGCG ACATGCCGTA TCCGCTGCAG GTGCGGCTGC TGCGCGTGCT GCAGGAGCGC CTCGTCAACC CGCTCGGGTC GACGAAGACG ATCGCCGTGG ACATCGCGAT CATCTGCGCG ACGCACCGTG ACTTGCGCGA GATGATCGCG CAGAACCGTT TCCGCGAGGA TCTCTACTAC CGGCTGAACG GCCTCGTGGT GCGCCTGCCG CCGTTGCGCG ACCGCACGGA TCTCGCGGTC GTCGTGCAGA AGATGCTGCA GCGCGAAGCG TTCGCGGGGC CGGGCCGGCC GCCGCTGTCG GTCGCGCCGG ACGTCATGGA GTTGTTCGTG CGGTGCACGT GGCCGGGCAA CTTCCGCCAG CTCGGCAACC TGCTGCGCAC GGCGGCCGCG ATGGTCGACG ACGACGGTGA AATCCGGCGC GAGCACCTGC CCGACGACTT CTTCGACGAC CTGCGGCGCG GCGATGCGCA CGTCGGGCAC GCAGGACAGG CGGCGCCCGA TTCGCCTGCC GCGGCGAGCG CCGGGCCGTG CGTCGCGGAC GCGTTGCCGC CCGCCGACGC GCGCCTGCAG GACGTCGCCG CGTCCGCGAT CGCCGCCGCG CTCGCGCGTC ATGGCGGCAA CGTGTCCGCC GCGGCGCGCG CGCTCGGCGT CTCGCGCAAC ACGATCTACC GGAAGATGCC GGCCGCCGAC GCGGGACGCC AGCCGTCGTC CGACGAAGAC TGA
|
Protein sequence | MRDDVEQAAG SRAAHPAGWP APSIQKAHER SETFGLQVSA RPDYDVLSNA ALVLKREQSR VLCVHAMPVM ETLHEQIVNT QSMIVLTDAE GLILHSIGDD DFLRRAEKVA LRPGANWAEN RQGTNAIGTA LAELCPMVVH GDQHFLAANR FLTCSSVPIL DPYGDAIGVL DVTGDHRSYH QHTMALAKMS VQMIENHLFT TTFQETLQVS FHGRPEFLGT LMEGIVAFTA DGRFLSANRS AQFQLGMPLA ALRAHTLSSL FDVTSAQLID RMRASTDRHL MLNLGNGAVV CARVHFRRAT LAEGSRPTDV HDAGAPGARA NAVPAPAAGT SAGLSRLNYL DTGDAQVASV IAKVRKVIGK DIPILITGET GTGKELLAQA IHNDSPRRDA PFVAVNCASI PETLIESELF GYEEGAFTGA RRKGAIGKLL QANGGTLFLD EIGDMPYPLQ VRLLRVLQER LVNPLGSTKT IAVDIAIICA THRDLREMIA QNRFREDLYY RLNGLVVRLP PLRDRTDLAV VVQKMLQREA FAGPGRPPLS VAPDVMELFV RCTWPGNFRQ LGNLLRTAAA MVDDDGEIRR EHLPDDFFDD LRRGDAHVGH AGQAAPDSPA AASAGPCVAD ALPPADARLQ DVAASAIAAA LARHGGNVSA AARALGVSRN TIYRKMPAAD AGRQPSSDED
|
| |