| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5141 |
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| Symbol | |
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| ID | 6127952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 2217619 |
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| End bp | 2218542 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641652232 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001778760 |
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| Protein GI | 170737500 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.672809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.692186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCG CCCTGCCCGC CCGGATCCTG GGCCTCGCGT TCGCCGCCGC CATCGTGGCG
CCCGGCGCAC ACGCCGACAC GCCCGTCGTG GTGTCGTCGA AGATCGACAC CGAAGGCAAC
CTGCTCGGCA ACCTCATTTC ACAGGTGCTG AAGGCCCACG GCATTCCCGT CACCGAAAAG
ATCGCGCTCG GCACGACGCC GATCGTGCGC AAGGCGCTCA CGAGCGGCGA GATCGACGTC
TACCCCGAAT ACACGGGCAA CGCCGCATTC TTCTTCAACA AGGCCGACGA CCCTGTGTGG
AAGAACGCGA GCCAGGGCTA CGACACCGCG AAGAAACTCG ACTACGCGGC GAACCATCTC
GTGTGGCTCG CCCCGGCGCC CGCGAACAAC ACGTGGGGCG TCGCGCTGCT TGCGCCCGTC
GCGCAGTCGC AGCACCTGAA GACCTTCTCC GATTTCGGCA AGTGGGTGGC CGGCGGCGGC
AAGGTGAAGC TCGCGGCCTC GGCCGAATTC GTGAACAGCG CGTCCGCGCT GCCGTCGTTC
GAGAAAGCGT ACGGCTTCAA GCTGAAGCCC GAGCAGCTCG TCGTGCTGTC CGGCGGCGAC
ACGGCCGCGA CGATCAAGGC CGCCGCGAAC CAGACCGACG GCGTGAACGC CGCGATGGTC
TACGGCACCG ACGGCGGCAT CGCATCGAGC GGCCTCGCGG TGCTCGACGA CGACAAGCAC
GTGCAGCCCG TCTACGCGCC GGCGCCGGTG ATTCGCGAAG CCGCGCTGAA AGCGCATCCG
CAGATCGCCG ACTTGCTCAA GCCCGTGTTC GCGAGCCTCG ACCTGAAGAC GCTGCAATCG
CTGAACGCCC GCATCCAGCT CAACGGCGAG CCGGCGGCCG GCGTCGCGAA AAGCTACCTG
AAAGCGAAGG GTTTCGTGAA ATGA
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| Protein sequence | MKLALPARIL GLAFAAAIVA PGAHADTPVV VSSKIDTEGN LLGNLISQVL KAHGIPVTEK
IALGTTPIVR KALTSGEIDV YPEYTGNAAF FFNKADDPVW KNASQGYDTA KKLDYAANHL
VWLAPAPANN TWGVALLAPV AQSQHLKTFS DFGKWVAGGG KVKLAASAEF VNSASALPSF
EKAYGFKLKP EQLVVLSGGD TAATIKAAAN QTDGVNAAMV YGTDGGIASS GLAVLDDDKH
VQPVYAPAPV IREAALKAHP QIADLLKPVF ASLDLKTLQS LNARIQLNGE PAAGVAKSYL
KAKGFVK
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