| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5134 |
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| Symbol | |
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| ID | 6127946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2211490 |
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| End bp | 2212842 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641652226 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_001778754 |
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| Protein GI | 170737494 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.868376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.708085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCATC GCCTGCGGAT TTCGGCTGAC GGCTTGCCGG TCGGACAATT GACCTATGAT
GCCCGCCGCG ACGACTACGG TTTTTCCTAC GATCCGGCGT GGCTCGCGCG GGCAGACGCG
TTTGCGTTGT CGCCGTGCAT TCCGCTCGAT GGCGGCAAGC CGCCGGCGGG CGCGATCCAG
CGCTTCGTGG GCAATCTGCT TCCCGAGGGC CGAGCACTCG ACGTGGCCGC ATCGATGTAT
CAGATATCGA AGGACAACGT ATTCGGCCTG ATCCGGATGC TCGGCAAGGA GCCCGTTGGT
GCGTTGAGCT TCATTCCAGA CGACGATGAG GCCGGGCGGG CATCCGAACC TCTCGAACCC
GTGCGCCGAC CGATCTCCGC GGAGGAACTG GCCGACCGTA TTCGCAAGCG CGATGCGATC
CCGTTTCCCG TCTGGGACGA TCGGGTGCGC CTATCGATCG CCGGCCATCA GGACAAGCTG
CAGGTGCTCG TCGAAGGCGA GCATATCGCG CTTGTGGACG GGGCACTGAG CAGCTCGCAT
ATTCTGAAGC CCGAGTCGCG CAGCCCGAAC GCGCCATTCA TGGTCGCCAA CGAGCATTTC
TGCATGACGT TGGCGGCCCG CATGGGTTTG CCGGTCGCGC ATGTCGAGAT TCGACGCATC
CCCGAGCCCA TTCTGCTGAT CGAGCGATTC GACCGGCTCG TGACGACCGA CCCGGACGAC
CCGCAGCGCG CGAGCGCTGT GCGACGGCTT CATGTCATCG ATGGATGCCA GGCCCTCGAC
TTGCCGGCGA CGCTCAAATA CGAACGCAAT CTCGGCAACA ACGCGGACGT GCGCAATATT
CGCGAAGGCG TGAGCTTCGA GAAGCTGTTT ACGCTGACAT CGTCTCTGGA GACACCGGCC
GTCGCGCGCA CAGTCATGCT GCGCTGGGCG TTGCTGCAAC TGCTGATCGG CAACAGCGAC
GCGCATGGCA AGAACATTTC GTTTTTTGTC AGCAGCACCG GGCTCGAGCC GGCGCCGTTT
TACGATCTGG TATGCGTGAA CGTGTACGGC GACGCTTATG TGCAGGACAT GGCGATGGCG
TACGGAGATG TATTCCGGAC CGAGGAACTG ACCGCTTTCG CGCTCGCGGA CTTCGCGCAT
CGCGTGCAGA TCCGGCCGGC GCTCGTTGCG CGTGAAATGA CACGGATGGC GACGCTGGCT
GCGGAACTGG CTCCCGGGTT GGCGGAGGCG GGCGTCTATA TGGGCGACGA GCGTGCGTGG
GTGCATCGTA TCGCCGAGTA CGTGCGAGTG CAGGCGGAAC GCATCACGCG TATTGCGCCC
ATGGTGCCCA AGGTCGACGT TACGCTGCTC TGA
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| Protein sequence | MIHRLRISAD GLPVGQLTYD ARRDDYGFSY DPAWLARADA FALSPCIPLD GGKPPAGAIQ
RFVGNLLPEG RALDVAASMY QISKDNVFGL IRMLGKEPVG ALSFIPDDDE AGRASEPLEP
VRRPISAEEL ADRIRKRDAI PFPVWDDRVR LSIAGHQDKL QVLVEGEHIA LVDGALSSSH
ILKPESRSPN APFMVANEHF CMTLAARMGL PVAHVEIRRI PEPILLIERF DRLVTTDPDD
PQRASAVRRL HVIDGCQALD LPATLKYERN LGNNADVRNI REGVSFEKLF TLTSSLETPA
VARTVMLRWA LLQLLIGNSD AHGKNISFFV SSTGLEPAPF YDLVCVNVYG DAYVQDMAMA
YGDVFRTEEL TAFALADFAH RVQIRPALVA REMTRMATLA AELAPGLAEA GVYMGDERAW
VHRIAEYVRV QAERITRIAP MVPKVDVTLL
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