| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5108 |
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| Symbol | |
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| ID | 6127920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2186393 |
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| End bp | 2187289 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641652200 |
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| Product | choline ABC transporter, permease protein |
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| Protein accession | YP_001778728 |
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| Protein GI | 170737468 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | [TIGR03416] choline ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAA TGATTCCGCT CGGTACCTGG GTCGACCAGT CCGTTCACTA CCTGCTCGAC
CACGACGCGA AGACGTTCGA CGCGATCGGT CAAGCGATCG AAGGGCTCGC GGCATTCGTC
GAGCATGGCC TGCAGGCGAT CCCGATGTGG CTGATGATGG CGATCTTCAT CGGCGTCGGG
CTGTGGCGGG TGGGCTGGCG CTTCGCGCTG TTCACCACGC TGTCGCTGCT GCTGATCTTC
GCGACGGGCT TCTGGGATCA GACGGTCATC ACGCTCGGCC TCACGCTGTC GTCGACGATC
ATCAGCCTCG TGCTCGGCAT CCCGCTCGGC ATCTGGGCCG CGAAGAGCAA GTGGGTCGCC
GCGATCGTGC GCCCGATCCT CGACCTGATG CAGACGATGC CCGCGTTCGT CTACCTGATT
CCGGCCGCGA TGCTGTTCGG TCTCGGCCGC GTGCCGGGGA TCCTGTCGAC GGTGATCTTC
GCGATGCCGC CCGCGGTGCG TCTCACGAGC CTCGGCATCC GTCACGTGAA CCGCGAGATC
GTCGAAGCCG GCCAGGCGTT CGGCTGCACG CCGTGGCAGT TGCTGTACAA GGTGCAGTTC
CCGAACGCGC TGCCGTCGAT CATGCAGGGC GTGAACCAGA CGATCATGAT GGCGCTGTCG
ATGGTGATCA TCGCGTCGAT GGTCGGCGCG GGCGGCCTCG GCAACGACGT GCTCGCGAGT
ATCCAGCGCC TCGACATCGG TCTCGGCTTC GAAAGCGGTC TGTCGGTCGT GCTGCTCGCG
ATCATTCTCG ACCGCATCAC CGAGAGCTTC GGCCGCGCGC CGGGCACCGC GAAGGCGCCG
CTGTTCTCGG GCCTCAAGCA GCTGTTCCGC GTGAAGGCCG CGCCCGCGCA GGCCTGA
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| Protein sequence | MSEMIPLGTW VDQSVHYLLD HDAKTFDAIG QAIEGLAAFV EHGLQAIPMW LMMAIFIGVG
LWRVGWRFAL FTTLSLLLIF ATGFWDQTVI TLGLTLSSTI ISLVLGIPLG IWAAKSKWVA
AIVRPILDLM QTMPAFVYLI PAAMLFGLGR VPGILSTVIF AMPPAVRLTS LGIRHVNREI
VEAGQAFGCT PWQLLYKVQF PNALPSIMQG VNQTIMMALS MVIIASMVGA GGLGNDVLAS
IQRLDIGLGF ESGLSVVLLA IILDRITESF GRAPGTAKAP LFSGLKQLFR VKAAPAQA
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