Gene Bcenmc03_5072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5072 
Symbol 
ID6127884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2144200 
End bp2145399 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content65% 
IMG OID641652164 
Productmajor facilitator transporter 
Protein accessionYP_001778692 
Protein GI170737432 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTGT CGCTCGCCGT GAACTCCCGA GCCGCGCTCA TGCCGGCCGG GTTCCTTGCC 
CTCGGAACGT TCGCCATCGG CACCGAGGGC TTTATGATTG CGCCGCTGCT GCCGGTCATG
GCCAAGGACT TCGGTTTGCC GGTCCCGACC GTTGCGGTGC TCGTCATCGT CTTCACCCTT
GTGTTGGCGC TGTCATCACC GATCTCCACG GTTGCCACCG GCCGGATGGC GCGCAAGTGG
GTCTTGCTCG CAGCCATGTC GCTGTTCGCC ATCGGCAACG TGACGGCGGC GGTGTCCGCA
TCGTTCGCCT TGCTGATCGG AGCACGGGTA TTGATGGCTA TCGCTGCAGG CCTGTATGTA
CCAGCGGCCA ATGGGCTCGC CGGTGTCATC GTGCCGCCGA GCATGCGAGG CCGCGCACTC
GCCATCGTCA GCGCGGGCCA GACATTGGCC ATCGCACTCG GACTGCCGCT AGGCGGGATG
ATCGGTCACG CTTTCGGTTG GCGTGCGACC TTTCTGCTGG TCGGCGCAAT GAGCGTCATC
GCCATTGCGG GCATCTTCGC GGGTATTGCC CGCGACGCCG GAGAGGGAGT TGCCGTGGCG
AGCCTGCGCG AACGTGTGTC CGTGATCCGC CAGGCTCCGA TTCAGCGCTT GCTTGGAGTC
AGCCTGTTCT GGTCGATCGG CGCCTTTGCT GCCTATCCGT ACATCGCGGA ATACCTGGAT
GCCGTCCTTG CTTTCGGCCC GAATGCAATC ACGGCGACGG TTTCTCTATG GGGGCTTTCT
GCGGCAGCAG GGGTGATGAC TGGAGGTGTG TTCAATGACC GCTTCGGGGC CAATCGGGTG
GTGCACGGAT CGCTGATGCT GCTGGGCCTG TCGTTCCTGG CGCTGGCTAT CGCCTCGCGT
CTGCCGCCGC AGGTTGCCCT GGTTCCGGTG CTTGTTGCAG TCGCTGTCTG GGGCTTTACT
GTCTGGTCGT ACTTCCCGGC CCAGATGTCG CGGCTCATCG CGGCCGGCGC GCCGGCGCAA
GCGCCGGTTG CCCTCGCGCT CAATACGTCC ACCATGTACT TCGGTTTTTC TGTCGGCAGT
ACCTTGGGCG CCGCAGTGTT GAGCTCAGGC GCTGTCTGGG GCATCGGAGC CGTGGCGGCG
CTGGCCGAAC TGATCGCCTT GGCTCTCAAC GCGGTCCTTA GCAGAAACGC CCGTGCCTGA
 
Protein sequence
MNVSLAVNSR AALMPAGFLA LGTFAIGTEG FMIAPLLPVM AKDFGLPVPT VAVLVIVFTL 
VLALSSPIST VATGRMARKW VLLAAMSLFA IGNVTAAVSA SFALLIGARV LMAIAAGLYV
PAANGLAGVI VPPSMRGRAL AIVSAGQTLA IALGLPLGGM IGHAFGWRAT FLLVGAMSVI
AIAGIFAGIA RDAGEGVAVA SLRERVSVIR QAPIQRLLGV SLFWSIGAFA AYPYIAEYLD
AVLAFGPNAI TATVSLWGLS AAAGVMTGGV FNDRFGANRV VHGSLMLLGL SFLALAIASR
LPPQVALVPV LVAVAVWGFT VWSYFPAQMS RLIAAGAPAQ APVALALNTS TMYFGFSVGS
TLGAAVLSSG AVWGIGAVAA LAELIALALN AVLSRNARA