Gene Bcenmc03_5067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5067 
Symbol 
ID6127879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2139095 
End bp2139829 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content58% 
IMG OID641652159 
ProductTatD-related deoxyribonuclease 
Protein accessionYP_001778687 
Protein GI170737427 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGACT TCCATTCACA CCTTGACCTG TATCCCGATG GCCTCAAGCT TGCGCAGGAG 
GTGAACAGAA GGAACGAGTT TACCCTCGTG GTCACCACTA GTCCGCGCGC CTACCGGGCA
ACGTCGAATG TGTTTCTCGG TTTGAAGAAC ATCAAGGTGG GAATCGGCCT GCATCCGGAA
GTGGCTGCCG CCAAACAAGG AGAGCTGGGC GACCTTATTG AGGGAATCTC GCGAGCACGT
TTTGTTGGCG AGATTGGGAT GGATGGTTCC CCCAGATTTC GAGGCTCACT TTCTGTGCAG
GAGAGAGTCT TCCGAGCGGC CCTCGCTGAA TGCGGACGGT ACCAAGGAAA GGCGATGAGC
ATCCACTCGC GCGGTGCTGC ACGCCGAGTC GTGGAACTGC TGGCTACGAC GAAGCATGCC
GGCGTACCCG TGCTTCATTG GTTCTCGGGC GGGTTCGCTG AACTTGAGAC TGCTGTTCGC
ATTGGTTGTT GGTTCAGCGT TGGCCCTACG ATGCTCGAGG GTGAGAAGGG GCGGGCGCTG
GTGGCGCGAA TGCCTCTACA CCGAGTGCTA CCTGAAACGG ATGGTCCGTT TACGAGCGTG
GGCGGGATAC AACTGCAGCC GTGGGATGCA TGGTCCGTGC GAGCCCCTCT GGCGGCAATA
TGGGGCATGC AGGAAGATGA GGTAGGGGAG CAGATGAAGC AGAACCTTCA GCACTTGCTG
CGGCTATCAG GTTGA
 
Protein sequence
MIDFHSHLDL YPDGLKLAQE VNRRNEFTLV VTTSPRAYRA TSNVFLGLKN IKVGIGLHPE 
VAAAKQGELG DLIEGISRAR FVGEIGMDGS PRFRGSLSVQ ERVFRAALAE CGRYQGKAMS
IHSRGAARRV VELLATTKHA GVPVLHWFSG GFAELETAVR IGCWFSVGPT MLEGEKGRAL
VARMPLHRVL PETDGPFTSV GGIQLQPWDA WSVRAPLAAI WGMQEDEVGE QMKQNLQHLL
RLSG