| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5037 |
|---|
| Symbol | |
|---|
| ID | 6127849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 2097327 |
|---|
| End bp | 2099441 |
|---|
| Gene Length | 2115 bp |
|---|
| Protein Length | 704 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641652129 |
|---|
| Product | phospholipase C, phosphocholine-specific |
|---|
| Protein accession | YP_001778657 |
|---|
| Protein GI | 170737397 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3511] Phospholipase C |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.911407 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACTC ATTCGCGACG CGATTTTCTG AAGTTCTCGG CCGGCCTCGC CGGCGCGACC
GCCGCCACCG CACTGCTGCC GGAATCGATC CGCAAGGCGC TGGCGATCGA GCCGAACACC
GTGACGGGCA CGATCCAGGA CGTGCAGCAC ATCGTCGTGT TCATGCAGGA GAACCGCTCG
TTCGACCACT ACCTCGGTCA CCTGAGCGGC GTGCGCGGCT ACAACGACCG CTTTCCGGTC
ACGCTGCCGA ACGGCAAGCC GGTGTGGTTC CAGCCGCGCC AGGAGGACAA GTCGAGCGTG
ATCGCACCGT TCCGCTACGA CACGACCAAT CCGGGCGTCA ACGCGCAATG TATCGGCGGC
CTGCCGCATA CGTGGGCGAC GACGCACGGC GCGATCGACA ACGGCCGCGC GGATCAGTGG
GCCGTGCAGA AGTCGAACAT GACGATGGGC TATCACGTTC GCGACGACAT CCCGTTCCAC
TACGCGCTCG CGGATGCGTT CACGGTGTGC GACAACTACT TCTGCTCGAT CCCCGGCAAC
ACGCACCCGA ACCGCATGTA CCTGATGACG GGCATGGTCG ATCCGCTCGG CACGGGCGGC
GGCCCGCTGC TCGACAACAC CGACTACATC GACAACCAGT TCGACAAGAT CCAGTTGCCG
CCTTTCAGCT GGACGACCTA CCCGGAACGG CTCGAACAAG CCGGCATCTC GTGGCAGATC
TACCAGCAGG GCACCGGGTT CGACAACTTC ACCGGCAACT ACGGCACGAA CATGCTGGCG
TGCTTCAACA ACTTCGTGAA TGCGCCGGCC GGTTCGTCGC TGCAGACGCG CGGAATGAGT
ACGCGCCCGA TCACGCAGTT GAAGGCCGAC GTGCAGGCGA ATACGCTGCC GCAGGTGTCG
TGGCTGCTGC CGCCCGCCGC GTATTCGGAG CATCCGAAGT TCACGCCGCT GTACGGCGCG
TACTACCTGT CGACGATCCT CGATGCGCTG ACGTCCAACC CGGACGTGTG GAGCAAGACC
GTCCTGCTGA TCATGTACGA CGAGAACGAC GGCTTCTTCG ACCATGTCGT GCCGCCGTCG
GCGCCGACGC TGCCGGGCTC GGGCATGAGT ACCGTCGACG TGTCGCTCGA GCGGCACAAC
GTCGTGACCG CGACGCAAGC CGGCACCTAT ACGGCCGACA ACCTGCCGTA CGGCCTCGGC
CCGCGCGTGC CGATGTTCGT CGTGTCGCCG TGGTCGAAGG GCGGCTTCGT GTGCTCGCAG
GTGTTCGATC ACACGTCGGT GCTGCAATTC ATCGAAAAGC GCTTCGGCGT GATGGAGACC
AACATCTCGC CGTGGCGCCG CGCGATCTGC GGCGACCTGA CGTCGGCGCT CGATTTCTCG
AAATCGGATG CGACGCTGCC GACCCTGCCG AACACGCAGG CGTACGTCGC GCAGGCGGAC
CTGCAATGCT CGCGTGCGTC GTCGCAGACC GCGCCGGCCA GCACCGCGCA GCAGGTCGTG
ACCGCGCAGG AACCCGGCAC GCGGCCGGCG CGCGCGCTGC CGTACGAACT GCACGTCACC
GGGCAGCTTC AGGCGCAAGG CTATGCGCTG ACGTTCGCGA ATACCGGTAC GCAGGGCGCG
CACTTCTGGG TCTATACGGG CGACCCGACC GCGATGCCGC GCCGCTATAC GGTCGAAGCC
GGCAAGCAGC TGACCGATAC GTGGGCGCTC GATGCGAACG GCAACTATCT GGTGAGCGTG
TGGGGGCCGA ACGGCTATTT CCGGCGCTTC GCGGGGTCGG CGGCGGCGGA TGCCGCGGCC
AAGCCTGAAA TCACGCCGTG CTACGACACT GCGAACGGCG ACGTGTACGT GACGATCGCC
AATGCGGGCA CCGGCCCGCT CACGGTCACG GCGACCGATG TCGCGTACGG CGGCGCGGCG
CGCACGCTGA CGGTCCCGGC CGGGCAGCGC ATCGAAGCGC ATTGGGACCT GTCGTGCAGC
AGCCACTGGT ACGACCTGCA GTTCGCGGTG GCGGGCAATG CCGGCTGGAC GCGCCGCATC
GCGGGGCACG TCGAGACCGG CAAGCCGAGC ATCACCGACC CGGCGGCCGT GGCGCCGACG
ATCGCGGCGA TCTGA
|
|---|
| Protein sequence | MATHSRRDFL KFSAGLAGAT AATALLPESI RKALAIEPNT VTGTIQDVQH IVVFMQENRS
FDHYLGHLSG VRGYNDRFPV TLPNGKPVWF QPRQEDKSSV IAPFRYDTTN PGVNAQCIGG
LPHTWATTHG AIDNGRADQW AVQKSNMTMG YHVRDDIPFH YALADAFTVC DNYFCSIPGN
THPNRMYLMT GMVDPLGTGG GPLLDNTDYI DNQFDKIQLP PFSWTTYPER LEQAGISWQI
YQQGTGFDNF TGNYGTNMLA CFNNFVNAPA GSSLQTRGMS TRPITQLKAD VQANTLPQVS
WLLPPAAYSE HPKFTPLYGA YYLSTILDAL TSNPDVWSKT VLLIMYDEND GFFDHVVPPS
APTLPGSGMS TVDVSLERHN VVTATQAGTY TADNLPYGLG PRVPMFVVSP WSKGGFVCSQ
VFDHTSVLQF IEKRFGVMET NISPWRRAIC GDLTSALDFS KSDATLPTLP NTQAYVAQAD
LQCSRASSQT APASTAQQVV TAQEPGTRPA RALPYELHVT GQLQAQGYAL TFANTGTQGA
HFWVYTGDPT AMPRRYTVEA GKQLTDTWAL DANGNYLVSV WGPNGYFRRF AGSAAADAAA
KPEITPCYDT ANGDVYVTIA NAGTGPLTVT ATDVAYGGAA RTLTVPAGQR IEAHWDLSCS
SHWYDLQFAV AGNAGWTRRI AGHVETGKPS ITDPAAVAPT IAAI
|
|---|
| |