| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5006 |
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| Symbol | |
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| ID | 6127818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 2057870 |
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| End bp | 2060314 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641652098 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001778626 |
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| Protein GI | 170737366 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATAC AACGACTTTC CACGTACGCC CGCCGGATCG CGCTGATCGC GCTGCTGCAG
TTCGCGGCGA TCGCGACCGC GTCGGCGTTT CCGGCGGCAG CCTCCGCGCC CGTCGCGAGC
GGCGTCGGCG CCGCCGCGCC GGCCATTTCC CTGCCCGACG CCATCGCGCA GCTCAAGCAG
ATGCAGGCCG AGCTGGACCG CATCAAGCAG CAGACCTCGA CCGCGTCCAA CAGCAAGGAG
CTGGACGCGC TCGACGACTC GGCGCAAGAG CTGAGCACCG ATGTCGCGAA ACTGCAGAGC
GATCTCACGC CGCAACGTGC GCAGGTTCAG GCGCAGCTCG ACGTGCTCGG GCCGGCGCCG
GCCGAGGGCG CCGCGCCGGA AGCGCCGGCC GTCGCGAAGC AGCGGGCCGC GCTGGACGCG
CGCAAGACGC AGATCGACGC CGCGCTGAAG CAGGCCGCCG ACCAGAAAAC GAGCCTCACG
AACCTGACCG AACAGTTCGC GAAGCTGCAC CGCAGCCTGC TGAAGAACCA GCTCGCGTTC
CGTTCGGGCA GCATCTTCAG CGCGCAGTTC TGGTTGCCGC TGTTCCACCT GTCGCCGGAC
GATCGCCAGC GGCTCGAGGA TTTCGACGAC GAACTGTTCG ACATGCTGCG CTCGTCGTGG
GCGCCGGGGC AGCGGGCGAT CACCACCGTG CTGCTGATCG CCGCATTCGC CGCCTGGCTC
GGCGGCCGCC GGCTCATCGA GCGCGGGCTC GCGTGGATCG CGCTGAACCG CCTGCCGCCC
ACCCGCTTGC GCCGCAGTGC GCTGGCGCTG TCGACCGCCC TGTCGACCTT CCTCGCGACG
GCCATCGCGA TCCAGATCCT CTACCTCGCC GTTGCACGCC ACTACGAGCT CACGCCGTCG
CTGACCGACC TGTGGGACCA GTTCGCAAAG CTCGCCGCGA CCTGCGCACT GATCGCCGGG
CTCGGCCGCG CCCTGCTCTG CACGAAGCAT CCGTCGTGGC GCCTGCCCGC GCTCGCCGAT
CCCGTCGCGC TCGCGATGAA GCCGTTCCCC AGCATCCTGG CCGGACTGCT GCTGGTATCC
GGTACGCTCG AATCGATCAA CCGGATCGTC GACACCAGCC TGTCGGTCAC GCTGTTCGGT
CGCGGCATCG TGTCGCTCGT CGTCGCGCTG ACGGTCGGCG CGTCGCTGCT GCGCGCGAAT
CGTGCACGCA GCGCCCTCGC GGCGGCAGGC GAGGCACCGG AGCAGCGCTC TACGCTCGCC
GGGCTGATCC ATGCCGGCGT CACGCTCGCG ATCGTCGCGT CGTTGATCGC ACTCCTGATC
GGTTACATCA CGGTCGCGCG CTTCATCACG TACGAGCTCG TGTGGTTCGA GATCGTGCTG
TGCGCGACCT ACATCCTGAT CCAGTTGACG CGCGACGCGA GCGAAAGCCT GTTCTCGTCG
AGCCTGTCGA CGGGCCAGCA GATCAAGCAC CTGTTCGCGC TCGAAGACCG TCACCTGGAC
CAGGCGCGCA CGGTCCTGTC CGGCTTCGGC ACGAGCCTGC TGATGCTGAT CGCGGCGATC
GCGCTGGTGA CCGGCGGTTT CGGCACGACG CCGGGCGACC TGCTCGACAG CGCGGTCGCG
ATGATCGGCA GCCAGCGGCT GCAGAGCCTG AACATCATGC CCGACCGGAT CTTGAACGCC
GTGATCGGCT TCGCGATCGG GTTCTACCTG CTGCGCTCGC TGCGCCGCTG GCTCGACGGC
GAATTCATGC CCGCGCTCGG CATGGATACG GGCATGCGCG TGTCGCTGAT CACGCTGTTC
ACCAACGTCG GCTACGTGCT GCTCGTGCTG ATGACGCTCG GGCTGCTCGG CGTCAGGTGG
AACAATCTCG CGTGGATCGT CAGTGCGTTG TCGGTGGGTA TCGGCTTCGG CCTGCAGGAG
ATCGTGAAGA ACTTCGTGTC GGGGCTGATC CTGCTGACCG AGCGCCCGGT GAAGGTGGGC
GACATGGTCA GCATCGCGGG CGTCGAAGGC GACATCCGCC GCATCAACGT GCGCGCGACC
GAAATTCAGC TGAGCGACCG CTCGACCGTG ATCGTGCCGA ATTCGCAATT GATCTCGCAG
AACGTGCGCA ACGTGACGAT GGGCAACAGC ACACAGGGCG TCGCAACGCT GGTGCTGACG
TTCCCGCTGA ACACCGATCC GGAGCAGGTG CGCGACCTGC TGCTCGATGC GTATCGCGAG
CACCCGGCGA TTCTCGACAA GCCGGCGCCG TCGGTGACGT TCAGCCAGCT CGCGCCGGAC
GGGATCACGC TGAGCGTGAC GGGTTACGTG TCGAGCCCGC GGATCGCGAG TTCGACGAAG
AGCGATCTGC TGTTCGAGAT CCTCAAGCAG TTGCGCGCGG CGGGGATCAC GCTGTCGAGC
CCGCAGATGC TGGTCGTGCA GAACATGCCG GCGAACGAGA AGTAA
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| Protein sequence | MSIQRLSTYA RRIALIALLQ FAAIATASAF PAAASAPVAS GVGAAAPAIS LPDAIAQLKQ
MQAELDRIKQ QTSTASNSKE LDALDDSAQE LSTDVAKLQS DLTPQRAQVQ AQLDVLGPAP
AEGAAPEAPA VAKQRAALDA RKTQIDAALK QAADQKTSLT NLTEQFAKLH RSLLKNQLAF
RSGSIFSAQF WLPLFHLSPD DRQRLEDFDD ELFDMLRSSW APGQRAITTV LLIAAFAAWL
GGRRLIERGL AWIALNRLPP TRLRRSALAL STALSTFLAT AIAIQILYLA VARHYELTPS
LTDLWDQFAK LAATCALIAG LGRALLCTKH PSWRLPALAD PVALAMKPFP SILAGLLLVS
GTLESINRIV DTSLSVTLFG RGIVSLVVAL TVGASLLRAN RARSALAAAG EAPEQRSTLA
GLIHAGVTLA IVASLIALLI GYITVARFIT YELVWFEIVL CATYILIQLT RDASESLFSS
SLSTGQQIKH LFALEDRHLD QARTVLSGFG TSLLMLIAAI ALVTGGFGTT PGDLLDSAVA
MIGSQRLQSL NIMPDRILNA VIGFAIGFYL LRSLRRWLDG EFMPALGMDT GMRVSLITLF
TNVGYVLLVL MTLGLLGVRW NNLAWIVSAL SVGIGFGLQE IVKNFVSGLI LLTERPVKVG
DMVSIAGVEG DIRRINVRAT EIQLSDRSTV IVPNSQLISQ NVRNVTMGNS TQGVATLVLT
FPLNTDPEQV RDLLLDAYRE HPAILDKPAP SVTFSQLAPD GITLSVTGYV SSPRIASSTK
SDLLFEILKQ LRAAGITLSS PQMLVVQNMP ANEK
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