| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5005 |
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| Symbol | |
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| ID | 6127817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2056361 |
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| End bp | 2057818 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641652097 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001778625 |
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| Protein GI | 170737365 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.844775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGGGA GAGTTTGCGT GAGCGCTAGG AGCTTGAAAG GTGGCGCGTG TCCATGGATC
TTCGGTCTGA TGTTGGTTTC AATTGCATGC CATGCCGAAA CGCGCGGGAT TCCCGATGGC
CTGGCCGATC CGTTGCTGAC CCGTCCTTCA GTGCTGGATG CGGGGAAGCG ATTGCCGGGC
GATGACGCGC CAGTTGTATG CGCTTCGTCG ACCCACCCGG CGAAGCCGCT GACGATCGGT
GATGCGGTTG ATCTTGCGCT ATGCCACAAC CCCCGTATTC GAGCGGCGTG GGCATCGATC
AAGATCCAGG CCGCTGCGGC GGGGGAAGCC AGATCGGCAT GGCTCCCCAC CGTCAACGGT
GCGATCAGCC AACTGACGAC CTATAACCGG TATCCCGATG CTCCATCGAT GAATACGCGC
GGCGTCGGTC GAACCTCGAA CGCGACGTTG AACTGGCGGC TGCTCGACTT TGGCGGGCGA
GCTGCAAACG GCGCGGCGGC GCAACAGCTG CTGACGGCAG CGCTGGCGGG CCACGACGCA
GCGATGCAAA AGGCGGTCGT GGATGTCATT GGGAGTTATT TCGATGTTCA GAATGCGCAA
GCGGCGTTTG CAGCGCGTAC CGAGTCCGCG ACCTTGGCGG AATCGACGCT GCGTGCGTCG
CATAAGCGGC TGGCCATGGG CGTTGCATCC CGAGCGGACG TATTACAGGC GGAAACGGCG
TTGGCCAAGG CATTGCTCGC GGCGCGGCGA GCCGGCGGCG AGGTGGCTCG GGCCCGCGCC
GAACTGGTCT TTGCGACCGG CCTGCCGGCC GGCACGCGGG TCGAAGTCGA GGAGGCGGTC
GTACCGGTTG CGCTCGACGC GGAGCGCCAG CTGAGCGACT GGCTTCGCGC GGCCGAAGAT
TCTCACCCCG AGATCCGTGC AGCGCGGGCC AGATGGAAGG CTGCGCAAGC GAAGGTCACG
GCCGTGCGCT CCGACGGAAT GCCGACACTC GATCTAAGCG GAACGCTGTC CCGGAACGGC
TACCCGAACC AGGGGTTGCA GTCGGTGCGG GCGACGCAAA CCAGCATCGG CTTGACTTTG
ACGATTCCGT TCTTTGACGG TTTTTCGCGC ACGTATCGGA TTCGCGGTGC GCAGGCTCAG
GCCGAACTGG CGCAGGCACA GCTTCTCGAT ACGCAGCAGC AGATTCTGCG TGATGTGCTG
AAGGCCCACG CTGATGCGGA GGCGACGGCA GACAGCCTGG ATGCGTCTGC ACGCTTGCTG
GCCGCAGCGG AGGCGGCACT GGCATCGGCA CGCAATCGTT ACGCGTTCGG CGCAGGCGAT
ATTCTGGAAC TGCTGTCGGC GCAAGCGGCG CTTGCCGATG CCCGTCAGGA ACGGGTGCGA
ACGCTGGCCG AATGGGAGGC GGCGCGGCTT CGACTGTTTG CCAGCGCCGG CATCATCGGC
CGATGGGCAT TTCGGTAG
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| Protein sequence | MHGRVCVSAR SLKGGACPWI FGLMLVSIAC HAETRGIPDG LADPLLTRPS VLDAGKRLPG
DDAPVVCASS THPAKPLTIG DAVDLALCHN PRIRAAWASI KIQAAAAGEA RSAWLPTVNG
AISQLTTYNR YPDAPSMNTR GVGRTSNATL NWRLLDFGGR AANGAAAQQL LTAALAGHDA
AMQKAVVDVI GSYFDVQNAQ AAFAARTESA TLAESTLRAS HKRLAMGVAS RADVLQAETA
LAKALLAARR AGGEVARARA ELVFATGLPA GTRVEVEEAV VPVALDAERQ LSDWLRAAED
SHPEIRAARA RWKAAQAKVT AVRSDGMPTL DLSGTLSRNG YPNQGLQSVR ATQTSIGLTL
TIPFFDGFSR TYRIRGAQAQ AELAQAQLLD TQQQILRDVL KAHADAEATA DSLDASARLL
AAAEAALASA RNRYAFGAGD ILELLSAQAA LADARQERVR TLAEWEAARL RLFASAGIIG
RWAFR
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