Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5002 |
Symbol | |
ID | 6127814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 2048160 |
End bp | 2052758 |
Gene Length | 4599 bp |
Protein Length | 1532 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641652094 |
Product | hemolysin-type calcium-binding region |
Protein accession | YP_001778622 |
Protein GI | 170737362 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0763111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.53255 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATAA CTGGTCGTGA AGAGTTGTTC AAGGGGATGC TTTTGGGGCA GGACGCCATT GATCTTATCA ATAAGAGTCC ATTGCTCGTG GATCAAATAA TTAAATACAA TGAAGATGTG CTGAGTAAGG ATTTGAATCC AATCGAGGTT AGCGCGGGCG AGCGGGGAAT ATTCTGGGAT CGTGGGCGGC CTGGAATTGT ATTTGGGAAT TATGCTGGCG TGACGTTTGA CAAGCTCGAT CCACGTGTAT TGGTCGGTAT TTTGAGTCAC GAGATTGGTC ACTATGTCAA TGACGCACGA GCTCAAGCTC GTGAGCAGTA TCACGCGAAT GAAATGCGAA ACGATTATCA TTTGGCGGCG ATGGTCGGGG TGATGAAGGA GGCTGAGGCA GCCTATAACA ACTGGTTAGT GGCGCGAGAA GTCGCGAAAA ATGGTGGTGG CGCGCTTCCT GTACTTGGAG ATCGGCGGGA TCACGTCACG GCGCCGGGGT TTGATATCAA TGGTGCGTTC ACTAGGGTCT ACGAGGCGAA TGTTGGAAAA ATGCCTGCCG ATGTGCTAAA GCAGGTCATG CTCGAGGTCG GGGGAAACTA TCTGGCGCGA GCACATCCTG GGGCAGATCC GGATACGACA TATTATGAGC AAAATGGCGC CGCCTATGGA GCGTCTGAAA AGCGATTATC TCAATCGCCG GTCATCGGAG TGAGCTATGC GTTGAATCTG GCAACAGGTT TTATCAAGTC CACGAAGTTG ACTTTCTCCA CGGGTACAGT GCAAGTCAAC GAGTACAACA ACGGGGTATT GGGTGCCGCA ACGTTATACG GCCCGAACGG TCAGATGACG GAGTATGTGA AGTACGCAAC GAATGGCATC AAGCTTCAGG AAACTCGCTA TACAGACGAC GGCCGAATTG CCACCACGCG GACCGACGTC AACGGCGACG GTATCTTCGA CAACATCAAA ACGGAAACCC TCCTCGCCGA CGGCGCCAGC GTAATCCGCG AAGACATCAA CGGCGACGGC GTTGTCGATC GCAATTTCGT CGTAAACGGC GGCCAGCGCT ACGACCTGTC CAAGGTCCGC GATGCCGCCT TTGCCGACAG CTTGCTGTCA CGATATCGCG CGACAGGGCT GCTGAGTGGT ACGAGCTTCC TCGACCTGAG CCAGATCATT TCCCGCACGC TGACCTATGG CGGTCGAAAC GACTACGGTT TCACGATGCC GTCCGGCTGG TACAACCCGA TCGGTGCATT CTACGAAGCC AAAAGCGCTG CATTCGACAA AGCCGCCTCC ATTGCCGACA AGACACCTGT CCTGCTCGAC GCGAACCGAT GGGGAGTAGG TGTCAGTGCG CTTCAGTCGC GCGACGCGAA CCGCGACGGC AAACTGACCG GCGCGGAACT GGACGGGCTA CAAGTCTGGA TCGATGCGAA CGAGGACGGT ATCGGCGACG TCGGTGAATT CAGGTCGCTG GCGCAAGCCG GGATCACCGA GATCCGCGCG GTCGACTATG ACGTCATCAC GCGGGGTAAC AGCTACCACG CATCGGCACC GGTCGCGGCG CCGTTGAAAC CCTGGGAAGC ATCGCAACCC GGCCGAATGT ACTTGGCCCC GGCCGTTCCG CTGTCGAACT ACCGAACGCT GCGCGATAAC GACAAGATCT ACTGGATCAA CTCCAGAGAC TTCATCATGT TCGGCCCGAC GCAGATCAAG GTCAGTCCTT CCAATCGGAG CTACCTCATC GGTACCGACG GGAACGACGT ATTCGATGCG AATTACTACG CTGCCTATGG CCACTGGATC GACAGCAATC TGCTCGTCAA TTTCCTCGCA GGCGACGGCA ACGACATGAT GGGCGGCAGC AGCCGCAACG ACAATCTGTG GGGCGGCACC GGCAACGACA CGCTGTTCGG CTATGACGGC GACGACAGGC TGTACGGCGA GGAGGGCGAC GACGAACTCA ATGGGGGTGC CGGCAACGAC GTGCTCGACG GCGGTATCGG CAACGACAAA CTGTTCGGCC ACGTCGGTAA CGACATCATG AACGGCGGCG ACGGCGACGA CATCATGCTG GGCTTCACCG CATCGAACGA TAGCAAGCAA ACATTGGCCT GGGGCGAAAC GGATGACGAC ATCATGTACG GCGGCGCGGG CAACGACCGG ATGTGGGGTG GCGTCGGCCA CGACTACATG GACGGTGGCG ACGGGGCTGA CTTCGTGAGT GGCGGGGACG GAAACGATAC GGTGTTCGGC GGCGCGGGGA ACGATGAACT GCATGGTGAT GCAGGCAACG ACCGGCTTCT TGGAGAGGCC GGCAACGATC GCATTTTCGG CGAGGCCGGG GACGATGTGC TCTGGGGCGG CGATGGCGAT GACGTGCTGG TCGGCTTCAC TGCCAGCAAC GATGCGAAGC AAACGTTGTC GTGGGGTGAG TCCGACAACG ACATGCTGTA TGGCGGCAAT GGCAACGATG CACTGTACGG CGGTCTCGGC AACGACTACC TCGATGGCGG CAACGACAAC GATTTTCTCG ACGGTGGCGA TGGCGACGAC CGGCTCTTTG GCGGCGCGGG CGACGACGAA CTGAACGGCG GCAACGGCCA CGATGCGCTT TCGGGGGAAA CCGGTAACGA CAAGATTTTC GGCGGCGCAG GCAACGACAC GATCTGGGGC GGCGACGGCG ACGATATTCT CGTCGGCTTT ACGGCCAGCA ATGACGCAAA GCAGTCGCTG GCCGCGTGGG AAACCGATGA CGATACGATC TACGGCGGAG CCGGAAACGA TCTGATCCTT GGCGGTCTCG GCAACGATCT GCTCCACGGC GAGGCCGGCA ACGATGAAAT TCAGGGTGGG GACGGCCACG ACAAGCTTTA TGGCGGCGAT GGCAACGACC GACTGTTCGG CCAGGTCGGA AACGACATCC TGTACGGTGG CGCGGGCGAC GATTTGCTGG TGGGCTTTAC TGGTGACAAT GAGGCGAAGA GGACACTAGG ACCCGGCGAA ACCGACGATG ACTATCTCTA TGGTGGAGAA GGCAATGACA CGCTGCTCGG TGGTCTGGGC GACGACTATC TCGACGGTGG GGCCGGTGCG GATCACATGG AAGGCGGCGA AGGTAACGAT ACTTATATCG TGAACAGCGT CAATGACGTG GTTCTCGAAT ACGCAAACGA GGGTTACGAC ACGGTAATCA GCAGCGCAAA CTACATTCTC AACGCCAATA TTGAGGAATT GAGGCTCGTC GAGGGGTTCA ACATCAACGG CACGGGCAAT GCGCTCGATA ACCGGATCGT CGGCAACAGC GCAGACAACA TTCTCGATGG CGTTACGGGT GCCGACACGA TGATCGGCGG AAAGGGCAAC GATACCTACT ACGTCGACAA TGTCGGCGAC CGCGTCGTGG AATTCGCCGG CGAGGGCATC GATACGGTGC AGAGCAAGAT CAGCTATACG TTGGGCGAAC ACGTCGAGAA TTTGAACCTG CTGGATTTCG GTAAGCCGGA AAAAGGGCTC GTCGATGGCG TGGCCGTTCA CGTGTACGGG TACCCGAAAG CCAACGAGCT GGATTACATG CAAGGCGATG CGGTTCCGAG ATTCCAGGGA ACGTGTGCGC TGACGTCGAT CGCGAATTTG CTTACGCAAA CCGGTACGCC GATTACCGAG GGGGACGTCG TCCGACGCGC GATCGACAAC CAATGGGCAG TCACCAGCCC GGCGGCGACG GATTACCAGC GAGGCGGATC GAACTACGTT CAGCAACAGG CACTGCTCGC GAGTTACGGT ATTGCAAACA ACCTGCTTGC CGGATACGAC GAGCATGCGG TAGCGAATCT CGTCCGCAGT GGTCGTGGCG TGATACTGGC GCTGAACTCG GGCCGTCTTT GGGAAGACAG CGCTTATCTC GATGGCGGCG GCGTGAATCA CGTCGTAACC GTGACGGGCG CGGTCTATGG AGACGCAGAT GGCGAGCTCA AGGGCTTTTA TATTGCGGAC TCAGGCCGCC GGCGCGTCAG CGACATGACG CGCTACATCA GCCTTCAGGA GTTCCGGGCG GCCGCCAACG TACCGAATGC CTACGCGATC TACACGGCCG AAGCGCTGAA ACTGTGGAAT GAGGACATCG ACGGCACGGG TAACGCACTC GATAACACGA TCATCGGCAA CCGCGGCAAC AATGTGCTGG ACGGCGGTGC CGGCAACGAC ATCCTGATCG GCGGACTGGG CAACGATACC TATCGATTCG GCCGCGGGTC CGGCTGCGAC ACGATCCGGG ACGACGACGA AACGCTCGGC AACAGCGATG TGATCAGCAT CGGCGCCGGC GTATCCGCGG ATCAATTGTG GTTTCGTCAC GTCGGCAACG ATCTCGAGAT CAGTATCCTC GGCACCGGCG ATACCGCAAC GGTTCGGGAC TGGTATCTGG GTTCACGGTA TCAGATCGAG CAGATCCGTG TCGATGACGG GCGGACGCTC GTTAACGCCG ATGTCGAGAA GCTGGTACAG GCCATGGCGG TCTGGTCGCC GCCGGCTGCG GGATCAGTAA CGCTGTCTCC TGAGCATCAG GCCGCGCTTG CGCCGACGCT GGCGACGAGC TGGCGTTAA
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Protein sequence | MKITGREELF KGMLLGQDAI DLINKSPLLV DQIIKYNEDV LSKDLNPIEV SAGERGIFWD RGRPGIVFGN YAGVTFDKLD PRVLVGILSH EIGHYVNDAR AQAREQYHAN EMRNDYHLAA MVGVMKEAEA AYNNWLVARE VAKNGGGALP VLGDRRDHVT APGFDINGAF TRVYEANVGK MPADVLKQVM LEVGGNYLAR AHPGADPDTT YYEQNGAAYG ASEKRLSQSP VIGVSYALNL ATGFIKSTKL TFSTGTVQVN EYNNGVLGAA TLYGPNGQMT EYVKYATNGI KLQETRYTDD GRIATTRTDV NGDGIFDNIK TETLLADGAS VIREDINGDG VVDRNFVVNG GQRYDLSKVR DAAFADSLLS RYRATGLLSG TSFLDLSQII SRTLTYGGRN DYGFTMPSGW YNPIGAFYEA KSAAFDKAAS IADKTPVLLD ANRWGVGVSA LQSRDANRDG KLTGAELDGL QVWIDANEDG IGDVGEFRSL AQAGITEIRA VDYDVITRGN SYHASAPVAA PLKPWEASQP GRMYLAPAVP LSNYRTLRDN DKIYWINSRD FIMFGPTQIK VSPSNRSYLI GTDGNDVFDA NYYAAYGHWI DSNLLVNFLA GDGNDMMGGS SRNDNLWGGT GNDTLFGYDG DDRLYGEEGD DELNGGAGND VLDGGIGNDK LFGHVGNDIM NGGDGDDIML GFTASNDSKQ TLAWGETDDD IMYGGAGNDR MWGGVGHDYM DGGDGADFVS GGDGNDTVFG GAGNDELHGD AGNDRLLGEA GNDRIFGEAG DDVLWGGDGD DVLVGFTASN DAKQTLSWGE SDNDMLYGGN GNDALYGGLG NDYLDGGNDN DFLDGGDGDD RLFGGAGDDE LNGGNGHDAL SGETGNDKIF GGAGNDTIWG GDGDDILVGF TASNDAKQSL AAWETDDDTI YGGAGNDLIL GGLGNDLLHG EAGNDEIQGG DGHDKLYGGD GNDRLFGQVG NDILYGGAGD DLLVGFTGDN EAKRTLGPGE TDDDYLYGGE GNDTLLGGLG DDYLDGGAGA DHMEGGEGND TYIVNSVNDV VLEYANEGYD TVISSANYIL NANIEELRLV EGFNINGTGN ALDNRIVGNS ADNILDGVTG ADTMIGGKGN DTYYVDNVGD RVVEFAGEGI DTVQSKISYT LGEHVENLNL LDFGKPEKGL VDGVAVHVYG YPKANELDYM QGDAVPRFQG TCALTSIANL LTQTGTPITE GDVVRRAIDN QWAVTSPAAT DYQRGGSNYV QQQALLASYG IANNLLAGYD EHAVANLVRS GRGVILALNS GRLWEDSAYL DGGGVNHVVT VTGAVYGDAD GELKGFYIAD SGRRRVSDMT RYISLQEFRA AANVPNAYAI YTAEALKLWN EDIDGTGNAL DNTIIGNRGN NVLDGGAGND ILIGGLGNDT YRFGRGSGCD TIRDDDETLG NSDVISIGAG VSADQLWFRH VGNDLEISIL GTGDTATVRD WYLGSRYQIE QIRVDDGRTL VNADVEKLVQ AMAVWSPPAA GSVTLSPEHQ AALAPTLATS WR
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