Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4995 |
Symbol | |
ID | 6127807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 2039686 |
End bp | 2040360 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641652087 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001778615 |
Protein GI | 170737355 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.11542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAG GAAGCAAGGC CGCCACGTCC GACCCCCGCG CGCTTGCGTC CGATGCGCGG CGTAAATACG ATCCCGAGCA AACCAAGCGC AACATCCTCG ATGTCGCCAC GCAGGAATTC TCCGCGATGG GCCTCGCCGG TGCGCGCGTC GACGCGATCG CCGAGCGCAC GAACACGACG AAGCGGATGC TCTATTACTA CTTCGAAAGC AAGGAAGGCC TGTACGAGGC CGTGCTGGAG AAGGTGTATG GCGACATCCG CGCGCTCGAG CAGGAGCTGC ACGTCGGCGA CATGGAGCCG CGCGAAGGCA TGCGCCGCCT CGTCGAATTC ACGTTCGACT ATCACGACAA GCATCGCGAC TTCGTCCGCC TCGTGTCGAT CGAGAACATC CACGGCGCGA AGTATGTCGA ACAGTTGAAG TCGTTCAAGA ACCGCAACGT CAGCATCATC AAGACGCTCG AGGAACTGGT CGAGCGCGGG GCGGCCAGCG GCGTGTTCCG CAAGGACATC GACGCATTCG ACCTGCACCT GCTGATCAGC TCGTTCTGCT TCCACCGCGT GGCGAACCGC TACACGTTCG GCGCTGCATT CGGCCGCGAT CCGTCGGCAC CGCGCCTGCG CGCGCGGCAT CGCGACACGA TCGCCGACGC GGTGCTCCGC TACGTCGCCG CGTAA
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Protein sequence | MKAGSKAATS DPRALASDAR RKYDPEQTKR NILDVATQEF SAMGLAGARV DAIAERTNTT KRMLYYYFES KEGLYEAVLE KVYGDIRALE QELHVGDMEP REGMRRLVEF TFDYHDKHRD FVRLVSIENI HGAKYVEQLK SFKNRNVSII KTLEELVERG AASGVFRKDI DAFDLHLLIS SFCFHRVANR YTFGAAFGRD PSAPRLRARH RDTIADAVLR YVAA
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