Gene Bcenmc03_4987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4987 
Symbol 
ID6127799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2030113 
End bp2030733 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content69% 
IMG OID641652079 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001778607 
Protein GI170737347 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCCA CGCATTTGCT GTTGATTTAT CTCGCCGCGC TGGCGGCCAT TTACGCGGTA 
CCGGGGCCCG ACATGGCGCT CGTGCTGCAG ACCAGCATCG GCCGCGGCGT GCGGCCGGGG
ATGGCGGCGG CGGCCGGCCT GTCGCTCGCG CGCACCGTGC ACGTGACGCT GTCGGCATGC
GGCGTCGCGG CGTTGATTCG CAGCGCGCCG TGGCTCTACG AGGTGATCCG CTATGGCGGC
GCGCTTTATC TCGCGTATGT CGCGATCCAG GTGTTCCGCT CGCCGGTGTT CGCGCTCGGC
GACGGCGACG CGCCGGCGGG CGAGTTGCGC CAGTCGTTCG TGAAGGGGCT GTTGACCAAC
CTGCTGAACC CGAAGGCGCT GCTGTTCTGC TCGGTGCTGC TGCCGCAGTT CGTGCGGCCC
GAGGTCGGGC CGGTCGTCTG GCAGATGTTC GAGCTCGGCG CGCTGCTGGT GGCGGCCGGC
GTGTGCTTCG ACCTCGCGTG CGTGTTCGGC GCGTCGCGCA TCGCGGCGTG GATGCGCGCG
CATCCGCTCG CGCAGACGGT GCAGCGCTGG ACCTTTTCCG CTGCGTTGAT CGGTTTCGCG
CTGCGGCTGT CGATGGATTG A
 
Protein sequence
MISTHLLLIY LAALAAIYAV PGPDMALVLQ TSIGRGVRPG MAAAAGLSLA RTVHVTLSAC 
GVAALIRSAP WLYEVIRYGG ALYLAYVAIQ VFRSPVFALG DGDAPAGELR QSFVKGLLTN
LLNPKALLFC SVLLPQFVRP EVGPVVWQMF ELGALLVAAG VCFDLACVFG ASRIAAWMRA
HPLAQTVQRW TFSAALIGFA LRLSMD