Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4975 |
Symbol | |
ID | 6128853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 2016357 |
End bp | 2017781 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641652067 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001778595 |
Protein GI | 170737335 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACA GCCCCGCCCA AGGTGGTCGG ACGACCGACT TCTTGCCATA CCTCGTCGCC GCGACGTTCT TCATGGAGTA CCTTGATACG ACCGTGATCG CGACGGCGCT ACCGCAAATG GCCAACTCGT TCGGCGTGGG GCCTAACGCG CTGAGTCTCG GGATGACGGC CTACATGTTG GCGCTGGCGG TGTTCATTCC GATCAGCGGC TGGATCGCGG ATCGCTATGG CTCGCGCACC GTGTTCGCGA GTGCGATCGT CGTCTTTACC GGCGCGTCGG TGCTGTGCGG GCTGTCCGAA GGCGTGATGT CGTTCACGGC TGCCCGGCTG CTGCAGGGTG TCGGCGGGGC GATGATGGTG CCGGTCGGGC GAATGATCGT CGTGCGAAGT ACCGAGAAGG CGAAGCTGAT GCGTGCGATC GCGACGATCA CGTGGCCGGG CATCGTCGCC CCCGTCGTCG GGCCGCCGAT CGGCGGCTTC ATCACGACCT ACGCGTCGTG GCGATGGATC TTCCTGTTGA ACGTCCCGTT CGGCCTTGCC GCACTCGTTT GTACCTGGCT GATCGTCCGG AACACGCGGG CCGACGAGCA ACGGCCACTC GACTGGGTTG GCTTCGTGCT GGCCGGTGGC GCATTGACCT GCTTGCTGAT CGGTACCGAA GCGGCCGGCC AGCAGGATGT CGACTTCACG CGCGCGGGTG TCCTGGTGGG CGCAAGCGTG CTGTTCGGTA TCGCTGCGTG GCTGTATGCG CGACGCTGCG CGCATCCGCT GCTCGATTTC ACGACGCTGA AGGTGCCGAC GTTCTCGGTG ACGGTCATCA CCGGATCGAT CACGCGGATG GCGATCAACG CCGTCCCGTA CCTGCTGCCG CTGCTGTTCC AGATCGGCTT CGGGCTGTCG CCGTTCCAGT CAGGTCTGCT GCTGCTCGCG AGTGCACTCG GCAACCTCGG GATGAAGGCG GGCACGTCGT GGATACTCGA CCGTTACGGC TTTCGGCGTG TCGCGCTCGT CGACGTGACG ATCGTCGGCA TCTTCACGAT CGCATGCGGT TGGCTGACCG CGTCGACGCC GCTGGCGATC ACGCTGCTCG TCGTATTCGT CTATGGGCTC ACGCGGTCGA TGCAGTTCAC GACGCTCGCG ACGCTGGCTT ATGCGGATAT CCCCTCTCAC CAGACGAGCG CGGCCAGCAC GCTGTGGAGC GCCGCGCAGC AAATGACGAT CGGGATGGGG ATCGCGTTCG GTGCATTGTC GCTGCGGCTC GCAGCATTGG TGCGCGGCGA TGCGGCCGGC ATGCACTACG TGCTCGCCGA TTTTCGCTGG GCGTTCATCG CGGCGGGCGT GCTCGCGCTG CTGACGTTGC CGGGCTATGC ACGGCTGGCT TCCGATGCCG GCGACCGGCT GCGGGCCAAC ATGGCGCGGG GATAG
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Protein sequence | MTDSPAQGGR TTDFLPYLVA ATFFMEYLDT TVIATALPQM ANSFGVGPNA LSLGMTAYML ALAVFIPISG WIADRYGSRT VFASAIVVFT GASVLCGLSE GVMSFTAARL LQGVGGAMMV PVGRMIVVRS TEKAKLMRAI ATITWPGIVA PVVGPPIGGF ITTYASWRWI FLLNVPFGLA ALVCTWLIVR NTRADEQRPL DWVGFVLAGG ALTCLLIGTE AAGQQDVDFT RAGVLVGASV LFGIAAWLYA RRCAHPLLDF TTLKVPTFSV TVITGSITRM AINAVPYLLP LLFQIGFGLS PFQSGLLLLA SALGNLGMKA GTSWILDRYG FRRVALVDVT IVGIFTIACG WLTASTPLAI TLLVVFVYGL TRSMQFTTLA TLAYADIPSH QTSAASTLWS AAQQMTIGMG IAFGALSLRL AALVRGDAAG MHYVLADFRW AFIAAGVLAL LTLPGYARLA SDAGDRLRAN MARG
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