Gene Bcenmc03_4971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4971 
Symbol 
ID6127783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2005822 
End bp2006682 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content71% 
IMG OID641652058 
Product2-aminoethylphosphonate ABC transport system, membrane component PhnV 
Protein accessionYP_001778591 
Protein GI170737331 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID[TIGR03255] 2-aminoethylphosphonate ABC transport system, membrane component PhnV 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00261372 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.133024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCTG AATTCCGTAT CGGGCAGGCC GTGCCGCGTC ACCCGCTCGG CTGGACCGAC 
GCGCTGCTCA AGCATGCGTC GCGCGTCGCG CTCGCGCTGG CCGCATTCGC GTGCTTCTGG
CTGTTCGTGC TGCCGGTCGT CGTCGTAGCG CTGTCGAGCG TGTCGACGCA ATGGTCGGGC
ACGATTCTGC CGGCCGGCTA CAGCCTGCGC TGGTTCGAGC GGCTCGGCTC GCCGGAATAC
GACGCGCTGC TGACGAGCCT CGAAATCGGC TTCGGCGTAT CGGCGCTCGG CACGATCCTC
GGGCTGTGGC TGGCGCTCGC GCTCGAAGGG CGCGACCGGC GCGGCTTGGG CGCGCTCGTC
GACGCGCTCG TGATGGTGCC GAACGGCGTG CCGAGCGTCG TGCTCGGGCT CGCGGTGCTG
ATCGCGTATC ACCAGAAGCC GCTCGACCTG TCGAGCTCGG CGGCGATCGT CGTGCTGGTG
CAGCTCGCGC TGATTCTGCC GTTCTGCTAT CGCTGCGCGG CCGCCGCGCT GCGCCCGGAA
CTGACCGTGC TGCGCGAAGC CGCGGCGAGC CTCGGTGCGC CGCCCGCGAT GGTGTTGCGT
CGCGTGCTGC TGCCGCAGCT CGTGCCGGCA CTGCGTGCGA GCCTCGCGCT CGGCTTCGCG
CTGTCGCTCG GCGAGCTCGG CGCAACGCTG ACGGTGTATC CGCCCGGTTT CGCGACCGTG
CCGATCGTCG TGATCGGCCA GGTGGAGCGC GGTTACTACC TGCCCGCCTC GGCGCTGTCG
CTGCTGATGC TCGGCGCATC GCTCGCGGCG CTGCTGCTGA TCGCCGCGAG CGTGCCGCGC
GGCAAGCGGG CGGCATCATG A
 
Protein sequence
MSAEFRIGQA VPRHPLGWTD ALLKHASRVA LALAAFACFW LFVLPVVVVA LSSVSTQWSG 
TILPAGYSLR WFERLGSPEY DALLTSLEIG FGVSALGTIL GLWLALALEG RDRRGLGALV
DALVMVPNGV PSVVLGLAVL IAYHQKPLDL SSSAAIVVLV QLALILPFCY RCAAAALRPE
LTVLREAAAS LGAPPAMVLR RVLLPQLVPA LRASLALGFA LSLGELGATL TVYPPGFATV
PIVVIGQVER GYYLPASALS LLMLGASLAA LLLIAASVPR GKRAAS