Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4966 |
Symbol | |
ID | 6127778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 1999888 |
End bp | 2001231 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641652053 |
Product | major facilitator transporter |
Protein accession | YP_001778586 |
Protein GI | 170737326 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.051147 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCACA CCACCCACAC GAGCGCCGCG CCGGCGCAGG CGGCCGGCAC GGTCCGGCGC ACGTCGGCGC GCTACAAGAT CCTCGCGCTG CTCGCGATCG GCACGATGAT CAACTATCTC GACCGCACCG TGCTGGGCGT GGCTGCGCCG CAGCTCACCA AGGAGCTCGG CATCAATGCG GCCGTGATGG GCATCATGTT CTCCGCGTTT TCGTGGACGT ACGTGGCGAT GCAGGTGCCC GGCGGCCTGT TCCTCGACCG CTTCGGCAGC AAGGTCACCT ATTACTGGTC GATGACGCTG TGGTCGCTGT GCACGTTCCT GCAAGGCTTC GTGCCGGGCG TCGCGACGCT GCTCGCGTGC CGGCTCGGTC TCGGTGTGAC GGAAGCGCCG TGCTTCCCGA CCAACAGCCG CGTCGTCGCG ACGTGGTTCC CGCAGAACGA ACGCGCGATG GCGACGGGTA CCTATACGGT CGGCGAATAC ATCGGCCTCG CGTTCTTCAG CCCGGTGCTG TTCGCGCTGA TGGGCGCGTT CGGCTGGCGC TCGCTGTTCT GGGTCGTGGG CGCGGTCGGC ATTGCGTTCG GCCTGATCTG GTGGAAGTTC TACCACGAGC CGCGCAACCA TCCGGGCGCG AACTCCGAGG AACTCGCGTA CATCGAAGCG GGCGGCGGTC TCGTTCACGG CGCGCGCAAG AGCGGCGACA AGGGCGGCAA GCCGGCGCAG GCCCAGTTCA GCTGGTCGAT GGTCGGCCAG TTGGTGAAGA AGCGCCAGCT CGCGGGCATC TGCCTCGGCC AGTTCGCCGG CAACTCGACG CTCGTGTTCT TCCTGACCTG GTTCCCGACT TATCTGGCAA CCGAACGCCA CATGGGCTGG CTGAAGATCG GCTTCTTTGC GGTGATGCCG TTCATCGCCG CGTCGGTCGG CGTGATGTTC GGCGGGATCT TCTCCGACTG GCTGCTGCGC CGCGGCAAGT CCGCGAACCT CGCACGCAAG CTGCCGATCA TCGCGGGCCT GCTGCTCGCT TCGACGATCA TTCTCGCGAA CTACGTGCAG AGCAACGAAG CGGTGATCGC GATCATGTCG GTCGCATTCT TCGCGCAGGG CATGGCCGCA CTCGGCTGGA CGCTCGTGTC GGATATCGCA CCGGACGGCC TGCTCGGCGT GACGGGCGGC ATCTTCAACT TCGCGGCGAA CCTCGCCGGC ATCATCACGC CGCTCGTCGT CGGCTTCATC GTCGCGTCGA CCGGCTCGTT CGTCGGCGCG CTCGTGTTCA TCGGCGTGAT CGCGCTGGTC GGCGCGCTGT CGTACATCTT CGTCGTCGGC GACATCAAGC GGATCGAGCT GTAA
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Protein sequence | MQHTTHTSAA PAQAAGTVRR TSARYKILAL LAIGTMINYL DRTVLGVAAP QLTKELGINA AVMGIMFSAF SWTYVAMQVP GGLFLDRFGS KVTYYWSMTL WSLCTFLQGF VPGVATLLAC RLGLGVTEAP CFPTNSRVVA TWFPQNERAM ATGTYTVGEY IGLAFFSPVL FALMGAFGWR SLFWVVGAVG IAFGLIWWKF YHEPRNHPGA NSEELAYIEA GGGLVHGARK SGDKGGKPAQ AQFSWSMVGQ LVKKRQLAGI CLGQFAGNST LVFFLTWFPT YLATERHMGW LKIGFFAVMP FIAASVGVMF GGIFSDWLLR RGKSANLARK LPIIAGLLLA STIILANYVQ SNEAVIAIMS VAFFAQGMAA LGWTLVSDIA PDGLLGVTGG IFNFAANLAG IITPLVVGFI VASTGSFVGA LVFIGVIALV GALSYIFVVG DIKRIEL
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