| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4965 |
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| Symbol | |
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| ID | 6127777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 1999000 |
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| End bp | 1999854 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641652052 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001778585 |
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| Protein GI | 170737325 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0261415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCC CGTCGTTTCT GATCGGCCTG ATCGGCCAGG GCATCGGCGG TTCGCTGTCG
CCCGCGATGC ACGAGGAAGA AGGGTTCCGC CAGGGTTTCG GCTACGTGTA CCGGCGCATC
GATCTCGATG TGCTCGGCGT GACCGCCGAC GCGCTGCCGC AGCTGCTCGA CGCCGCGCAG
CGGATGGGCT ACAACGGGCT GAACATCACG CACCCGTGCA AGCAGCGCGT GATCGAGCAC
CTCGACGCGC TGTCGGACGA CGCGCGCGCG CTCGGCGCGG TGAACACCGT GCTGTTCAAG
GACGGCAAGC GGATCGGCCA CAACACCGAC TGGTCGGGTT TCGCGAAATC GTTCAGCCGC
GGGCTGCCCG GCGCGTCGCT CGAACGCGTC GTCCAGCTCG GTGCGGGCGG CGCGGGCGCG
GCCGTCGCGC ACGCGGCGCT GCAGATGGGC GCGGCCGAAC TGACGATTTT CGACGTCGAC
GGCACGCGCG CCACCGCGCT GGCGGGCGAA TTGCAGCAAC GCTTCCCCGC CGCCCGGGTC
ACGCCGGGCA GCGATCTCGC GGCCGCGATG CGCGCCGCGA CCGGCCTGAT CCACTGCACG
CCGACCGGCA TGGTCAAGCA TCCGGGCCTG CCGCTGCCGG CCGACCTGCT CCACGCGGGC
ATGTGGGTGG CCGACATCGT GTATTTCCCG CTCGAAACCG AACTGATCCA CGCCGCGCGC
GCGGCCGGCT GCGCCACGCT GCCGGGCGGC GGGATGGCCG TGTACCAGGC CGTCGACGCG
TTCGAGCTCT TCACCGGACG CACGCCGGAC GCCGAGCGGA TGTTCAGTCA CTTTCAGTCG
CTCGTCGCGC GCTGA
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| Protein sequence | MSRPSFLIGL IGQGIGGSLS PAMHEEEGFR QGFGYVYRRI DLDVLGVTAD ALPQLLDAAQ
RMGYNGLNIT HPCKQRVIEH LDALSDDARA LGAVNTVLFK DGKRIGHNTD WSGFAKSFSR
GLPGASLERV VQLGAGGAGA AVAHAALQMG AAELTIFDVD GTRATALAGE LQQRFPAARV
TPGSDLAAAM RAATGLIHCT PTGMVKHPGL PLPADLLHAG MWVADIVYFP LETELIHAAR
AAGCATLPGG GMAVYQAVDA FELFTGRTPD AERMFSHFQS LVAR
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