Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4898 |
Symbol | |
ID | 6127710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1924563 |
End bp | 1925483 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641651985 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001778518 |
Protein GI | 170737258 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.118323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTTCA CGCTGTCCCA GCTCCGCATC TTCCAGGCCG TCGTCGAGCA CGGCAGCCTG CGCGCGGCCG CCCGCGCGCT CGATCTCGCG CAAAGCGGCG TCACGCAGCA ACTGCAGGGC CTCGAGGCGA CGCTCGGCGC GACGCTGTTC ACGCGCACCA ACCGCGGGAT CGTGCCGACG GCCGTCGGCC AGCGGCTGCT CGCGCGTTCC GGTTCGATCC TCGGCGAATG CGAGCAGGTC GAGCGGGAAA TCCGTCAGTT GAGCGGTGCC TACGAAGGCA CCGTCACGCT CGGCCTCGTG ACCGAGCCGC TGATCGACGC GTTCGCGCCG GTGCTGACCG CGTTCCGCGC GCGCTTCGAC AAGGTGGACG TGCACCTGCG CACCGGCACG TCGCGGATGA TGATCGGCTG GCTGCGCGAG AGTGCGGTCG ATTTCGCGAT CGCGCTGGTC GCGAAGCAGA CCGACACGAC CGATCTCGCG GTCACGCCGC TGCGCACGTC GGCGCCGGTG GTCGTCTGCC GCAACGGGCA TCCGGCGATG CACGCGCAAT CGCTCGCCGA GCTGGGCGAC TACGGATGGG TGTCGACGCG CTCGCCGAAC CTGAGCGCCG ACCCGGTCGT CAACCGGCTG CTCGCGTACT TCGATACGCA CGGCCAGCCG CCGCCGAAGA TTCTGGCGAC CGTCGAAGGA ATGTTCGAGA CGCTGCAGAT CGTCACGCAG ACCGATTCCC TCGCGCTCGA AACCGAAGCG ATCACGCGGC ACGGGCCGTT CGCCGGCGCG CTCGTGAAGG TGCCGGTGCG CGAGCAGGCC GAAGCGCAGG ACATCTGCCT GCTGCAGCGC GCGGCCGTGC CGCTGACGCC CGCCGCGCAG GAACTCGCGA CGATGCTCGC GTCGTATTTA CGGGTGGTGC GCGGGCGGTA A
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Protein sequence | MAFTLSQLRI FQAVVEHGSL RAAARALDLA QSGVTQQLQG LEATLGATLF TRTNRGIVPT AVGQRLLARS GSILGECEQV EREIRQLSGA YEGTVTLGLV TEPLIDAFAP VLTAFRARFD KVDVHLRTGT SRMMIGWLRE SAVDFAIALV AKQTDTTDLA VTPLRTSAPV VVCRNGHPAM HAQSLAELGD YGWVSTRSPN LSADPVVNRL LAYFDTHGQP PPKILATVEG MFETLQIVTQ TDSLALETEA ITRHGPFAGA LVKVPVREQA EAQDICLLQR AAVPLTPAAQ ELATMLASYL RVVRGR
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