Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4875 |
Symbol | |
ID | 6127687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 1898376 |
End bp | 1899755 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641651962 |
Product | major facilitator transporter |
Protein accession | YP_001778495 |
Protein GI | 170737235 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATTT CGCACGCGCT GCATGCCGGC GATGACGCCC CGCGCGCCGA CGCGCCGTCC TCGGCGCAGC TTGCCGGCGA CGATTACGCG GCCAGCGAGC GCACGCTCGC CAAGGCGTTC CGGCGCATTC TGCCGTTCAT CTTCGTCTGC TACGTGATCA GCTATCTCGA CAGGACCAAC GTCGGTTTCG CGGCGCTCAC GATGAACAAG GATCTCGGTC TGACGGCCGA GCAGTTCGGT GTCGGTGCAG GCCTCTTCTT CATCGGCTAT TTCCTGTTCG AGATTCCGAG CAACCTGATC ATGCAGAAGG TCGGGGCGCG CGTATGGATC GCGAGAATCA TGATCACATG GGGCCTGTTC TCGATGGCGA CGGCATTCGT CGTCGGACCG AAGAGCTTTG CGGCCGCGCG TTTTCTGCTC GGGCTCGCCG AGGCGGGGTT CACGCCCGGC ATCTACCTGT ATTTCACGCA CTGGTTTCCC GGCAAGTGGC GAGCGAAGGT GACGGCCGCC TTCCTCGTCG GCATTCCCGT CGCGAACATG ATCGGCTCGC CGATTTCGGG CGCGCTGCTC GAACTCGGCG GCCTGCATGG GCTGCGCAGC TGGCAGTGGC TGCTGCTGAT CGAAGGCGTC CCTGCGGTGA TGCTCGGCAT CGCGTGCCTG TTCGTGCTGG CCGATCGTCC CGAGAAAGCC GCGTGGCTCA GTGACGAAGA GAAGGCGTCG CTCGCGAAGC GCCTCGCGTT CGAGCAGCGC GACATCGGCG CGAAGCACGG CAGCACACTG CGCGACGCGA TGACGAACTG GCGCGTGTTC GTGCTCGCGT TCGTCAACTT CTGCGGGATC GTCGGCTCGC TCGGCGTCGG CTTGTGGATG CCGCAGATCA TCAAGCAGTT CGGCGTCGAA CACGCGGTGG TCGGCTGGCT GACGGCCATC CCGTATGCGA TCGGCGCCGG TGCGATGCTC TGGTGGGCGC GTCTCGCCAA TCGCGCTGCC AACCGGATTC CGTATGTTGC CGGTGCGCTC GCACTCGCCG CGGCGGCGTT GTGTGCGAGC GCCTTCATGC ATGCGCCGGT TTTCAAGCTG ATCGCACTGT GCGTCACGGT GAGCGGAATC CTCGCGTTCC AGGCGACTTA CTGGGCCATC CCGTCGGGAT TCCTCACCGG CCGGGCCGCC GCGGGCGGAC TCGCGCTGAT CGTGTCGGTC GGCAATCTCG GCGGCTTCGT CGGGCCGTCG ATGATCGGTG CGCTCAAGCA ATTCTCGGGC GGCTTCACCG CGCCGCTCAT CGCCGTGTCG GGTGTGCTGC TGCTCGGCGC GTTGACCATC GCATGGCTCG GCGATCCGGG CTCGGGCGCC GGCGAAGCGC CTGTCACCCG CGAGACGTGA
|
Protein sequence | MTISHALHAG DDAPRADAPS SAQLAGDDYA ASERTLAKAF RRILPFIFVC YVISYLDRTN VGFAALTMNK DLGLTAEQFG VGAGLFFIGY FLFEIPSNLI MQKVGARVWI ARIMITWGLF SMATAFVVGP KSFAAARFLL GLAEAGFTPG IYLYFTHWFP GKWRAKVTAA FLVGIPVANM IGSPISGALL ELGGLHGLRS WQWLLLIEGV PAVMLGIACL FVLADRPEKA AWLSDEEKAS LAKRLAFEQR DIGAKHGSTL RDAMTNWRVF VLAFVNFCGI VGSLGVGLWM PQIIKQFGVE HAVVGWLTAI PYAIGAGAML WWARLANRAA NRIPYVAGAL ALAAAALCAS AFMHAPVFKL IALCVTVSGI LAFQATYWAI PSGFLTGRAA AGGLALIVSV GNLGGFVGPS MIGALKQFSG GFTAPLIAVS GVLLLGALTI AWLGDPGSGA GEAPVTRET
|
| |