| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4854 |
|---|
| Symbol | |
|---|
| ID | 6127666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 1877786 |
|---|
| End bp | 1878304 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641651941 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001778474 |
|---|
| Protein GI | 170737214 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0865062 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGCC GCTCCCCGAC ACGCGACATG CTGCTGGCCC TTGCGGCCGG TCTTTCCCTG
GCAGCTTTCA CCGTGCCCGC CCACGCCGAC GAGGCCGCCG GCCTCACGCC GCCAGCGCCG
GCCACGCCGG TGCTGGCGAC CACCGCGACC GGCGTGCAGA TCTATGCGTG CGAATACGAT
GCCGACCACC GGCTCGCGTG GGCCTTCAAG CGCCCGGAGG CGATGCTGTT CGATGAAAGC
GGCACGCTCG CCGTGCGGCA CGGTGCGGGG CCGTCGTGGG AAGCGCTCGA CGGCAGCCGC
ATTACCGGCA AGAAGCTCGC GGAAGTGCCG AGCGCAAACG CGGCCAGCGT TCCGCAACTG
CTGCTCGCGG CGACGCCGGC CGCAACCGGC ACGCTCGCCG GCGTGCGCTT CGTGCAGCGG
CTCGACACGG CGGGCGGCAC GCCGCCGGCC GCGACCTGCA CGACCGAGCA TGCGGTCGGC
CGCTTCCCGT ACTTCGCGCG CTACGTGTTC CTGAAGTGA
|
|---|
| Protein sequence | MPSRSPTRDM LLALAAGLSL AAFTVPAHAD EAAGLTPPAP ATPVLATTAT GVQIYACEYD
ADHRLAWAFK RPEAMLFDES GTLAVRHGAG PSWEALDGSR ITGKKLAEVP SANAASVPQL
LLAATPAATG TLAGVRFVQR LDTAGGTPPA ATCTTEHAVG RFPYFARYVF LK
|
|---|
| |