| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4817 |
|---|
| Symbol | |
|---|
| ID | 6127629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 1840069 |
|---|
| End bp | 1841391 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641651904 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001778437 |
|---|
| Protein GI | 170737177 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.896318 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCAG CCTTGCCGTC GATCTGCCCG CCCGAGCGCA CCGGCGTACG CGGCGTGACC
GTGCTCGTCT GCGGCGCGAA CGGCTTCATC GGGCGGGCGC TGTGCGCGCA GCTCGAAGCC
GGCGGGCATC GCGTGCTGCG CGGCGTGCGT CACGCGGCCG GCCCGTACGA CGTCGCGATC
GACTTCGCGC ACGACGTCGA TCCGCACGCG TGGCTCGCGC GGCTGAAGGG CGTCGACGTG
GTGATCAACG CGGTCGGCAT GCTGGCCGAT CGACGCGGCG CGACGCTCGA TGCCGTGCAT
CGCGCCGCGC CGAGCGCGCT CTTTACCGCG TGCTGCCGGG CCGGCGTGCG GCGCGTGATC
CAGATCTCGG CGCTCGGCGT CGAGCGCGGC GACACGCGGT ACTTCGCGAG CAAGCAGGCG
GCCGACCGTT TCCTGCAGAC GCTGCCGATC GACTTCCGCA TCGTGCGCCC CGCGCTCGTC
TACGGGGCGG CCGGCGCGTC CGCGCGGTTT TTCCGGATGC TCGCGAGCCT GCCCGTGCAC
GTGCTGCCGG CCGGCGGCCA TCAGCGACTG CGCCCGGTGC ATGTCGATGA TCTCGCCGAA
GTCGTCGCGC GGCTCGTGAT GCAGCCGAGC GATTCGCCGC CGGCGCGAGC CCGCCGCGTG
ATCGACGTGG TCGGCCGCGA CGAAGTCGAA TACCGCGAGA TGCTGGCCGC CTATCGCGCC
GCGCTCGGAT TTCCGCCGGC GGCCCGCGTG ACGCTGCCGG GCCGGCTGGT CGGCGCGGCG
GCCGCGCTGC TCGGCGTGTG GCCGGGGGCG ATGCTGACGC GCGACACGTG GACGATGCTG
CGCGGCGGCA ACACCGGCGA TCCGGTGGCC ACCGCGGCCG TGCTCGGCCG GCCGCCGCGC
GGCATCGACA GCTTCATCGG CGCGGAAGCC GCCGCGTTGC GCCGCGACGC GCTCGCGATG
TGGCGGCGCC CGTTGCTGTT GGGCGCGCTC GCGATCGTGT GGATCTGGAC GGCCATCGCC
AGCGCATTCA TCCATCCGCT GCACGCGAGC CTCGCGCTGC TTGCGCCCGC GCACCTGACG
GGCATGCCCG CGCTGATCGC GCTCTACGCG GCCAGCGCGG TGGATTTCGC GTTCGGGATC
GCGACCGTCG TCGCGCCGTC GCGGCGCCTG TGGGCCGCGC AGGCGGCGCT GATCGTCGCG
TACTCGGCGG TCATCGCGGT CACGATGCCG GGCCTGCTGG CCGAACCGTT CGGCCCCGTG
CTCAAGAACG TGCCGATTCT CGCCATCCTG TTGATCCTCT ATTCAGAAGA AGAACAAGCA
TGA
|
|---|
| Protein sequence | MNAALPSICP PERTGVRGVT VLVCGANGFI GRALCAQLEA GGHRVLRGVR HAAGPYDVAI
DFAHDVDPHA WLARLKGVDV VINAVGMLAD RRGATLDAVH RAAPSALFTA CCRAGVRRVI
QISALGVERG DTRYFASKQA ADRFLQTLPI DFRIVRPALV YGAAGASARF FRMLASLPVH
VLPAGGHQRL RPVHVDDLAE VVARLVMQPS DSPPARARRV IDVVGRDEVE YREMLAAYRA
ALGFPPAARV TLPGRLVGAA AALLGVWPGA MLTRDTWTML RGGNTGDPVA TAAVLGRPPR
GIDSFIGAEA AALRRDALAM WRRPLLLGAL AIVWIWTAIA SAFIHPLHAS LALLAPAHLT
GMPALIALYA ASAVDFAFGI ATVVAPSRRL WAAQAALIVA YSAVIAVTMP GLLAEPFGPV
LKNVPILAIL LILYSEEEQA
|
|---|
| |