Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4786 |
Symbol | |
ID | 6127598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 1812919 |
End bp | 1813749 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641651873 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001778406 |
Protein GI | 170737146 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.875923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.946498 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGCTT CCTTACCCGA GCGCGGCGTG CTGCGCCGCT TCGGCGCGCT GCCCGCGGCG GCGTTGCTCG CGGTGTGCTT CGTGCTGCCG CTGGCCGCGC TCATCGATGC GGCATGCGCG GGCGGCGGCC GCGCGTTCGC GGCGGTGTGG CGCGATCCGC TCGTCGCGGA TGCGATCGCG CGCTCGCTGG CGCTGGCGGT GGGCGCCGGC ACGCTGTCGG TCGCCGTCGG CGTTCCGGTC GCGTTCGCGC TCGCGGGACA GTCGCCGGCC CGTCGCCACT GGTCGCTCGC GCTGCTCGGC GTGCCGCTGG CGTTTTCCGG GCTGGTGATC GCGTACGGGT TCATCCTCGC ATTCGGCCGC GCGGGCTTCG TGACCACGCT GCTGGCCGCG CTGGGCGCCG ATCCGACCGT GGTCGGCGGC GCGATCTACA CGATGCCGGG GCTCGCGGTC GCCTATGCGT ACTACCTGAT CCCGCGCGTC GCGCTGATGA TCTATCCCAC GCTCGCGAAT CTCGACCGAC GGCCGCTCGA GGCGGCGCTG ACGCTCGGCG CACGGCCGTG GCGCGCGTGG CTCGACGTCG CGTGGCGCGA ACTGTGGCCG TCGGTCGCAT CCGCATGGTG CCTCGTGACC GCGATCGCGC TCGGCACGTA CGGCACGGCG CTCGCGCTGG CCGGCACGCA GATCAACATC CTGCCGCTGC TGATGTATTT GAAGCTGTCG GACGGGCAAA CCGATTTCTC GCAGGCGGCC GTGCTGTCGA TCGTGCTGAC GGCCATCTGT ACCTGCGTTC TGGCACTGGG AGAAGGTCTT GTTCGCCAAC GACGTCATTG A
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Protein sequence | MHASLPERGV LRRFGALPAA ALLAVCFVLP LAALIDAACA GGGRAFAAVW RDPLVADAIA RSLALAVGAG TLSVAVGVPV AFALAGQSPA RRHWSLALLG VPLAFSGLVI AYGFILAFGR AGFVTTLLAA LGADPTVVGG AIYTMPGLAV AYAYYLIPRV ALMIYPTLAN LDRRPLEAAL TLGARPWRAW LDVAWRELWP SVASAWCLVT AIALGTYGTA LALAGTQINI LPLLMYLKLS DGQTDFSQAA VLSIVLTAIC TCVLALGEGL VRQRRH
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