Gene Bcenmc03_4784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4784 
Symbol 
ID6127596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1810747 
End bp1811790 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content72% 
IMG OID641651871 
ProductABC transporter related 
Protein accessionYP_001778404 
Protein GI170737144 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCG AATTCGAACA CGTCAGTTTC CAGTATCCGG GCGCCCGCCA TGGCGTCGAC 
GACGTCACGC TGTCCGCCGC GCAGGGCGAA CTGCTCGCGG TGATGGGGCG CAGCGGCTCC
GGCAAATCCA CGCTGCTGCG GCTCGCGGCC GGGTTGCTCG ACGGCTGGCG CGGCCGCATC
GCGATCGGCG GCGACGACGT GGCCGGCGTG CCCGTGTGGC GGCGCGAGGT CGGGATGGTG
TTCCAGCACT ACGCGCTGTT CCCGAACCTG TCGGTGGTCG ACAACGTCGC GTACGGGCTG
CGGATGCGCG GCGTCGCGGC CGACGCCCGG CGCCGGCGCG CACTGGACAT GCTCGAGCGG
GTCGGGTTGT CCGGGCATGC GACGCGCGGC ATCGCGATGC TGTCCGGCGG ACAGCAGCAA
CGCGTCGCGC TTGCGCGGGC GCTCGTGATC GAGCCGAAGT TGCTGCTGCT CGACGAGCCG
CTGGCGGCGC TCGATGCCGG TATCCGTCAT CAGTTGCGCG ACGAGATCCG TGCGCTGCAA
CGCGCTTGCG GCGCGACGAC GCTGTTCGTC ACGCACGACC AGGACGAGGC GCTGAGCATG
GCCGACCGCG TCGCGATCGT CGACAGCGGT CGCGTGTTGC AGGCCGGCAC GCCGCGCGAC
CTGTACGAGC GCCCGGCGAC CGCCCAGGTC GCGCGCTTCG TCGGGCACTC GACGCTGCTG
CGCGGGTGCG TGCTCGCGCA CGGCGAAATC GACGTGCGCT TCGCGACGCT GCGCGCGGAC
ACCGGCGCGC AGCGGCCGGG TGCGGAGGTC GCGGTGCTGG TGCGGCCCGA GCATGTGCAG
GCCGATCCGC CGGAACACAG CGCCAACCGC ATCGACGGCC GTCGCGGCGA GGTGCGTTAC
TTCGGCGCGA CGCAGCGCTA CGACTTCATT CCGGACGGCT CGGCCGACGT GCTGCTGTGC
GAGGGGCGCG AGCCCGCCTC GCGCAGCATC GCGATCGACC CTTGCCATCT GCTCGTGCTG
CCGGCAGCGC CGGACGCGCA CTGA
 
Protein sequence
MSLEFEHVSF QYPGARHGVD DVTLSAAQGE LLAVMGRSGS GKSTLLRLAA GLLDGWRGRI 
AIGGDDVAGV PVWRREVGMV FQHYALFPNL SVVDNVAYGL RMRGVAADAR RRRALDMLER
VGLSGHATRG IAMLSGGQQQ RVALARALVI EPKLLLLDEP LAALDAGIRH QLRDEIRALQ
RACGATTLFV THDQDEALSM ADRVAIVDSG RVLQAGTPRD LYERPATAQV ARFVGHSTLL
RGCVLAHGEI DVRFATLRAD TGAQRPGAEV AVLVRPEHVQ ADPPEHSANR IDGRRGEVRY
FGATQRYDFI PDGSADVLLC EGREPASRSI AIDPCHLLVL PAAPDAH