| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4779 |
|---|
| Symbol | |
|---|
| ID | 6127591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 1802674 |
|---|
| End bp | 1806507 |
|---|
| Gene Length | 3834 bp |
|---|
| Protein Length | 1277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641651866 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001778399 |
|---|
| Protein GI | 170737139 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.409952 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.671241 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGCG CAGACAAAGA AAACGTACCC TCGACCCTCC ATGCCCTCGG CGGCATTGCA
CGCTCGCGCC GGACCCGGCG TATCGGCATC GGCGTGCTGA TCTTCCTCGT TTTATTCGGA
CTGCTCGGCT TCTTCGCGGC GCCGCCGCTG ATCCGCCATG TCGCCGAACA GCAATTGAGC
AAGCAGCTCG ACCGGCCGGC CACGATCCAG CGCATCGCAC TGAACCCGTA CACGCTGAAC
CTCGAAGCCG ACGGCATTCA TCTCGGCGAG CGCGGCGGCC AGGGCGACTT CATCGACATC
GGCAAGCTCG TCGTGAGGCC GTCGTGGTCG TCGCTGTTCC GCGGCGCGCC GATCGTCAAC
GAGGTCCGGC TCGATTCGCC GCGCTTTCAC GTCGTTCGCT ACGACGCGCA GCGTTTCAAC
TTCACCGACC TGATCGAGAA GTTCTCGTCG CCGACGCCGA AGCCGGACAG CAAGCCGACA
CAGTTCTCGG TGTCGAACAT CCAGGTCAAC GACGGCCGGA TCGATTTCGA CGATCGCCTG
CTGAACGAAA AGCACGTGGT CGACAACTGG ACGCTCGGCA TTCCGTACAT CGCGACGCTG
GCCTCGAAGA CGGACATCTT CGTCGAGCCG AAGCTGCGTG CGCGCTTCGA CGGCAGCCCG
ATCTCGATCG ACGGCAAGAC CAAGCCGTTC GCGCAATCGC GCGAATCGGA GATCGCGCTG
AAGTTCGACC GCCTCGACGT GCCGAAGCTG ATCTCGTACG TGCCGGCGAA GCTGCCGGTG
GCCGTGACGA GCGGCCTGCT CAGCAGCAAC CTCACGGTCA ATTTCGTGAT GAGTGGCGAG
ACGCCCGCGC TGCGCGTGTC GGGCACCGTC GACCTGAACG ACGCGAAGGT GACCGACCGC
GCATCGGCGC CGCTGTTCGC CGCGCGCGGC GTGCACGTCG CGGCGGCAGG GCTGGAACCG
CTGCGCAACG CGATGCACTT CGACGAGATC CGGCTCGACC AGCCGGTGAT CGACCTGTCG
CGCGACAAGC AGGGCGTGCT GAACGTCGAG AAGCTCGTCG CGCAGCCGGC CGCCGCGCCG
AAGGCCGAAG CCGGCAAGCC GGCCGCGTCG GCCGCCGCCG TTTCTGCCGC CACCGCTTCC
GGCGCGTCGT CCGGTGCTGT CGCCGCCGCC AGCGGCGCGA AGGCCGAAGG CAGTGCCGCC
GCGAGGGAAG CGCCGCCGCT CGACCTGACG ATCCGTCATG TCGCGATCGA CGGCGGCACG
ATCAACGTCG ACGACCGCGT GCCGGCGACG CCCACCGCGC TGTCGCTGAC GAAACTCGCC
GCGACGCTCG ATGGCTTCAC GCTGCAGGGC AAGACACCGG CGAAATACAC GCTGTCGACG
TCGCTGTCGC GCGGCGGCGA CGTGACGGCC GAAGGCGCAT TCAATCTCGC CGCGAAGCAG
GCCGACACGA AGCTGACGGT CGCCGCGCTC GCGTTGCCGG CGCTGCAGCC GTATCTCGGC
GAGGCGACGC GTGCGCGCGT GCTCGACGGC ACGCTCGGCG CGACCGTCAA CGCGAAGACC
GACTGGGGCA AGACGCCGCT CGCCGCGGAA GTCGCCGACA GCACGGTCAG CCTCAAGTCG
CTGAAGATCG CCGCGCCCGA CAACAAGGCG CCCGCGATCG CGCTGCCCGA CGCGAGCGCG
AAGATCGCGA AGATCGACGT CGCCGCGCGC ACCGCGGAAA TCGCGAGCGT CGACGCGACT
GGCCTCGCGC TCGACGTGAA GCGCCTGAAG GACGGCAAGA TTGACCTCGC GGCGCTGGCC
GAACCCGCGC AAGCCACGGT GCCGCCGCGC ACGGTCGCGC GCAAGGCCCA GGCTGCCGCG
CCGTCGTGGC ACTACCGGAT CGACGCGCTG AACGTGAAGG ACGCGTCCGC GAACTTCACC
GACCTGTCGA CGCCGCGCCC GGTGAAGCTG GCGATCAAGC CGCTGGAGCT GTCGGTGCAG
AAGGTGAGCG ACGACCTGAC GAAGCCGCTG CCGGTGCAAC TGAAGGCGAC GCTGAACCGC
AAGGGCTCGC TGAACGTGAC GGGCGACGTG ACCGCGCAGC CGCTGAAGCT CGGCCTGAAG
ATCAACGGCA ACCGCCTCGA CGCGGCCGCG TTCGAGCCGT ACTTCGGCAG CGCGCTGAAC
GCGACGATCG CGAGCGCGCT GCTCAACGCG CAGGGCAACC TGACGTTCGC GCAGGTGAAG
GACACGCCGC GCGCGACCTA TCGCGGCGAC GTCGCGCTGG TCGACGTGCG GATGCTCGAC
AAGGCAACCT CCGACCCGTT CGCCGGCTGG CGCTCGCTCG CGCTGTCGAA CCTGAAGGCG
AACTACGACG AGAAGGGCAC CGACGTCGAC GCCGCGCGCG TGACGTTCTC GAACTTCTAC
GGCCGCGTGC TGCTCGACGC GCAGGGCCGG CTGAACCTGA AGGACGTGGT CGCGAAGGAG
ACGGGCCCCG CGCAGTCGCT CACGCGCGAC GCGAGCAAGG GCGAGCCGGT GCCGCTGTCG
CCGGGCGTGA CGCCGCCGGC CGCCGCGCAG GCCGCCTCGG CCGCGGCCGC GCAGCAGGCG
TCCGTGCCGG CCGCCGCGTC GGCGACGGTG GTCGTGAAGG CGGCGCCGCA GCCGCAGAAC
CCGGTGCGGA TGCACTTCGG CGAACTGCTG CTGCAGAACG GCCGCGTCAC GTACACGGAC
AACTTCATCA AGCCGAACTA CACGGCGAAC CTCGTCGCGA TCAAGGGCAC GGTCGGCGCG
TTCGGTACGG ATTCGACGAC GTCCGCGCCG GTTGACGTCG CCGCGAACCT CGCGGGCAAC
GGGCCGATCT CGATCAAGGG CTCGGTGAAC CCGCTGATCG AGAAGCCGGC GCTCGACCTC
ACGGCCACCG CGCACGACAT CGAGCTGACC AACCTGACGC CTTACTCGGC GAAGTACGCG
GGCTATCCGA TCACGAAGGG CAAGCTCAAC GTCGACCTGC ACTACCAGCT CGCGAACGAC
CAGCTGTCGG CGAACAACCA CATCTTCATC GACCAGCTGA CGTTCGGCGA TCGCGTCGAG
AACGACACCG CGACGAAGCT GCCGGTGAAG CTCGCGATCT CGCTCTTGAA GAACACGCGC
GGCCAGATCG ACGTGAACCT GCCGGTGTCG GGCTCGCTGT CGAATCCGGA GTTCAGCGTC
GGCGGGCTGA TCTGGCACGC GGTGCTGAAC CTGATCGCGA AGGCTGTCAC GTCGCCGTTC
ACGCTGCTCG CGAATGCGTT CGGCGGCAGC GGCGGCGAGG ATCTCGGCTA CGTCGAGTTC
GCGCCAGGCT CGTACGCATT GACCGACGCG CAGCAGAAGA AGCTCGACAC CGTCGTGAAG
ATGCTGACCG AGAAGCCGTC GATCCGCCTC GACCTGATCG GCCGCGTCGA TCCGGCGCAG
GACACGCCGG GCCTGCGCGA CGCGTACGTC GAGCGGCTGG TGCGCCAGCA GAAGCTGAAG
GACGTGGTCG GCCAGGGCGA GAGCATCGAT CCGATGTCGG TGAAGGTCGA TAAGGCCGAA
TACTCGAAGT ACCTGACGCG CGCGTACAAG GCCGCCGACT TCAAGAAGCC GCGCAACCTG
GTGGGCCTGC AGAAGACGCT GCCCGATGCG GACATGAAGC AGGCGCTTGC CGATCACGCG
CCGGCCGACG ACAACGCGCT GCGTGCGCTC GCGCAGCAGC GCGCGCAGGC CGTGCGCCAG
TATCTCGACG GCAAGATCGA TTCGAGCCGC ATGTTCGTCG TCGCGCCGAA GCTCGACGCG
AAGGGCATCT CGGACAAGGG CGCGACGACC CGCGTCGACT TCGGGCTGCA GTAA
|
|---|
| Protein sequence | MASADKENVP STLHALGGIA RSRRTRRIGI GVLIFLVLFG LLGFFAAPPL IRHVAEQQLS
KQLDRPATIQ RIALNPYTLN LEADGIHLGE RGGQGDFIDI GKLVVRPSWS SLFRGAPIVN
EVRLDSPRFH VVRYDAQRFN FTDLIEKFSS PTPKPDSKPT QFSVSNIQVN DGRIDFDDRL
LNEKHVVDNW TLGIPYIATL ASKTDIFVEP KLRARFDGSP ISIDGKTKPF AQSRESEIAL
KFDRLDVPKL ISYVPAKLPV AVTSGLLSSN LTVNFVMSGE TPALRVSGTV DLNDAKVTDR
ASAPLFAARG VHVAAAGLEP LRNAMHFDEI RLDQPVIDLS RDKQGVLNVE KLVAQPAAAP
KAEAGKPAAS AAAVSAATAS GASSGAVAAA SGAKAEGSAA AREAPPLDLT IRHVAIDGGT
INVDDRVPAT PTALSLTKLA ATLDGFTLQG KTPAKYTLST SLSRGGDVTA EGAFNLAAKQ
ADTKLTVAAL ALPALQPYLG EATRARVLDG TLGATVNAKT DWGKTPLAAE VADSTVSLKS
LKIAAPDNKA PAIALPDASA KIAKIDVAAR TAEIASVDAT GLALDVKRLK DGKIDLAALA
EPAQATVPPR TVARKAQAAA PSWHYRIDAL NVKDASANFT DLSTPRPVKL AIKPLELSVQ
KVSDDLTKPL PVQLKATLNR KGSLNVTGDV TAQPLKLGLK INGNRLDAAA FEPYFGSALN
ATIASALLNA QGNLTFAQVK DTPRATYRGD VALVDVRMLD KATSDPFAGW RSLALSNLKA
NYDEKGTDVD AARVTFSNFY GRVLLDAQGR LNLKDVVAKE TGPAQSLTRD ASKGEPVPLS
PGVTPPAAAQ AASAAAAQQA SVPAAASATV VVKAAPQPQN PVRMHFGELL LQNGRVTYTD
NFIKPNYTAN LVAIKGTVGA FGTDSTTSAP VDVAANLAGN GPISIKGSVN PLIEKPALDL
TATAHDIELT NLTPYSAKYA GYPITKGKLN VDLHYQLAND QLSANNHIFI DQLTFGDRVE
NDTATKLPVK LAISLLKNTR GQIDVNLPVS GSLSNPEFSV GGLIWHAVLN LIAKAVTSPF
TLLANAFGGS GGEDLGYVEF APGSYALTDA QQKKLDTVVK MLTEKPSIRL DLIGRVDPAQ
DTPGLRDAYV ERLVRQQKLK DVVGQGESID PMSVKVDKAE YSKYLTRAYK AADFKKPRNL
VGLQKTLPDA DMKQALADHA PADDNALRAL AQQRAQAVRQ YLDGKIDSSR MFVVAPKLDA
KGISDKGATT RVDFGLQ
|
|---|
| |