| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4767 |
|---|
| Symbol | |
|---|
| ID | 6127579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 1788905 |
|---|
| End bp | 1789957 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641651854 |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_001778387 |
|---|
| Protein GI | 170737127 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.768046 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTGA ATGCACCGCT TGCCGGTATC CACATCGTCG AATTCGAAGG TCTCGGCCCC
GGCCCGCTCG CGGGCTGGAT GCTCGCCGGC ATGGGCGCAC GCATCACGCT GATCGCGCGC
CCGTCCGGCC GCACGAGCGC GCCGGATGCG CTGCGGGCTC GCGACGGCGA CTTGTTGCGC
GAAGGCAAGA CGATCGTCGA ACTCGACTTG AAGGTGCCGG CGGGGCGTGA CGCCGCGCTC
GACCTGATCG CGCAGGCCGA TGCGTTGATC GAGGGCTTGC GGCCCGGCGT GATGGAGCGG
CTCGGCCTCG GGCCCGACGC TTGCGCGCGC CGCAATCCCA AGCTCGTCTA CGGGCGCATG
ACGGGCTGGG GCCAGGACGG ACCGCTCGCG ACCGCCGCCG GGCACGATCT GAACTACGTC
GCGCTGACCG GGTTGCTGTC GTTGTCCGCG CCGCGCGACG GCCGGCCGGG CGTGCCGCCG
ACCGTCGTCG GCGATGCGGG CGGCGCGCTC GGGCTCGCGT TCGGGATCGT CTGCGCGTTG
CTCGACGTGC GCGGCGGCGG GCCGGGGCGC GTGGTCGACG GCGCGATCGT CGATATCGTG
TCGATGCTCG GATCGCTCGC ATTGTGGGCA CGCGCGAACG GGCAACTCGA CGGCGCGCAG
CCGAGCCTGT TCCACGACGC GCCGTTCTAC GACGTGTATC GCTGCGCCGA CGGCGAATGC
GTGACGATCG GCGCGCTCGA GCCGCCGTTC TATGCGCTGC TGGTCGAACG GCTCGGGCTG
ACCGACGTCG ATCCCGCGTC GCAGTACGAC CGCGCGCACT GGCCTGCGCT GAAGGCGCGT
TTCGCAGAGG TGTTCGCGCA GCAGCCATCC GCGCACTGGT GCGCGCTGCT CGAAGGCACC
GACGCGTGTT TCGCGCCGGT GCTGAGCGTG GCCGACGCGG CCGCGCACCC GCACAACGCG
GCGCGCGGGA TCTATCGGAC CGATGAGCAC GGGAACGTGC GGGCGCGGGT GGCGCCGCGG
TTTTTGCCGT TGGCGGGGGA TGAAACAGAC TAG
|
|---|
| Protein sequence | MSLNAPLAGI HIVEFEGLGP GPLAGWMLAG MGARITLIAR PSGRTSAPDA LRARDGDLLR
EGKTIVELDL KVPAGRDAAL DLIAQADALI EGLRPGVMER LGLGPDACAR RNPKLVYGRM
TGWGQDGPLA TAAGHDLNYV ALTGLLSLSA PRDGRPGVPP TVVGDAGGAL GLAFGIVCAL
LDVRGGGPGR VVDGAIVDIV SMLGSLALWA RANGQLDGAQ PSLFHDAPFY DVYRCADGEC
VTIGALEPPF YALLVERLGL TDVDPASQYD RAHWPALKAR FAEVFAQQPS AHWCALLEGT
DACFAPVLSV ADAAAHPHNA ARGIYRTDEH GNVRARVAPR FLPLAGDETD
|
|---|
| |