| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4760 |
|---|
| Symbol | |
|---|
| ID | 6127572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 1781346 |
|---|
| End bp | 1782500 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641651847 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001778380 |
|---|
| Protein GI | 170737120 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.661706 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTCG AACTCGAACT CGAACACCGG ATGATCCGCG ACCTCGTCGC GCGTTTCGTG
AAGGACGAAC TGATTCCGCT CGAAGCGGCG GTGATGGCGC GCGAGGCCGA CGGCCAGTGC
TTCGGGCTGC TCGCCGACGA ACGTGCGCGC CTCGACGAAC GCTCCCGGCA ACTCGGCCTG
TGGGGACTCG ATGCGCCGCT CGACGCGGGC GGCTCGGATC TGCCGGCCGT CGCGATGGTC
GGCGTGAACG AGGCGATCGG TACGACCGTG ACCCCGTACA TCCTGCCGCC CGACTCGCCG
AACCTGCGGA TGCTGTGCGA TGCGGCCGAC GCGGCGCAGC GCGCGCGCTA TCTCGACCCG
TACGCACGCG GCGCCACGCG TGCCGCGATG GCGATCTCCG AGCCGGGCGC CGGCTCCGAT
CCGGGCGCGC TGTCGACGAC CGCCGTGCGC GACGGCGACG GCTGGGTGCT GAACGGCCGG
AAGATCTGGA TCAGCCACGC GGCCGAAGCC GACTGGACGA TCGTGATGGC GCTGACCGAT
CGCAGCAAGG GCAAGCGCGG CGGCATGTCG GCGTTCATCG TCGAGCGCGA CACGCCGGGT
TTCGTCATCG AACGCCGGAT CCCGATGATC GGCGGGCTGT CGACCTACGA AATCGTGCTG
GAAGACTGCC GCATTCCCGG CGCGCAACTG CTGGGCCGGG AAGGCGCCGG CTTCGCGCCG
ATGCAGGCAC GGCTCGCGAA CCGGCGGCTG GAGATGGCCG CGTGGTGCAT CGGCCGCGCC
GAGCGCGCGG TCGCGCTCCT GTGCGACCAT GCGAAACAGC GCACGACCTT CGGCGTGCCG
CTCGCGGAGC GCCAGGCGGT CCAGTGGTGG GTCGCCGACG CGCTCACGCA GATCCACGCA
TGCCGCCTGA TGACTTACGA AGCGGCCGCG CGCGTGGATG CCGGGCAGGA CGCCCGCACG
CAGATCTCGA TGGTCAAGGT GTTCGCGACC GAAATGGCGT CGACCGTCAT CGATCATGCG
ATGCAGACGC TCGGCGCGAT GGGCATGACG AAGGAAATGC CGTTGCAGCA GATGGCCAGC
GAGGCGCGGC TGATGCGCAT CTTCGAAGGC CCGACCGAGG TGCACCGTTG GGTCGTCGCA
CGCAGCGTGC TCTGA
|
|---|
| Protein sequence | MNFELELEHR MIRDLVARFV KDELIPLEAA VMAREADGQC FGLLADERAR LDERSRQLGL
WGLDAPLDAG GSDLPAVAMV GVNEAIGTTV TPYILPPDSP NLRMLCDAAD AAQRARYLDP
YARGATRAAM AISEPGAGSD PGALSTTAVR DGDGWVLNGR KIWISHAAEA DWTIVMALTD
RSKGKRGGMS AFIVERDTPG FVIERRIPMI GGLSTYEIVL EDCRIPGAQL LGREGAGFAP
MQARLANRRL EMAAWCIGRA ERAVALLCDH AKQRTTFGVP LAERQAVQWW VADALTQIHA
CRLMTYEAAA RVDAGQDART QISMVKVFAT EMASTVIDHA MQTLGAMGMT KEMPLQQMAS
EARLMRIFEG PTEVHRWVVA RSVL
|
|---|
| |