| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4740 |
|---|
| Symbol | |
|---|
| ID | 6127552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 1757192 |
|---|
| End bp | 1758787 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641651827 |
|---|
| Product | thioredoxin domain-containing protein |
|---|
| Protein accession | YP_001778360 |
|---|
| Protein GI | 170737100 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2143] Thioredoxin-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.738245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCG TTCTCCGCAA TCTCACCGCC GCCTGCCTGT TCGTTGCCGC CGGTGCGGCG
CTCGCCGCCG CCACGCCCGC GGGCGCCCCG GTGGCGAGCG CATCGCCAGA CGGTGCGCAT
CTGCCGCCCG GCATCGCGTG GCAACACGGC GACGTCGATG CCGCGTTCGC GCTCGCGAAG
CGCGAGGGCA AGCCGCTGCT GCTGTACTGG GGCGCGGTAT GGTGCCCGTC GTGCAACCAG
GTGAAGTCGA CGATCTTCAG CCAGCAGGCA TTCAAGACGC GCTCGTCGTT CTTCGTGCCC
GTGTATCTCG ACGGCGATAC CGAAAGCGCG CAGAAGCTCG GCGAGCGTTT CAAGGTGCAC
GGCTATCCGA CGATGATCCT GTTCCGCCCC GACGGCACCG AAGTGACGCG GCTGCCGGGC
GAAGCGGATC TCGACCGCTA CATGCAGGCG CTGTCGCTCG GGATGACGGC CGCGCATCCT
GTGCGGCAGA CGCTCGCGAC GGCGCTGAAG AACGGCGCGT CGCTGACGCC GGACGAATGG
CGCCTGCTGG CCGACTATTC GTGGGATACC GACGGCGCGC TGCCGGTGCC GGCAGATCGT
GTCGCCGAGA CGCTGCAGTC GCTCGCGCAA CGCGCTCGGG CGGCCGGTGC GAAAGCCGAG
TCGGCGCGCT TCGCGCTGAA GTCGGCGGTG GTCGCCGCGT CGGACGACCC GACGCAGGCC
GGCGCGCTCG ACAAGGCAGC GCTCGCCGAT TCGCTGCGCA CGGTGCTGCA CGATGCCGCG
CTGTCGCGGG CCGATTCGGA TGTGCTGGTG GCCGCGCCCG CGCGCGTGGT CGCGTATCTC
GGCGGCGACG ACGCGCAGCG CTCGAAATTG CGCGGCGCGT ACGACACGGC GCTGGCGCGC
CTGTCGACCG ACACCACGCT GTCGTCGATC GACCGGCTGA TGGCGCTGCA CGGCCGCGTG
CTGCTCGCGC GCGGCGACGC ACGCAAGGGC ACACCACTCG CCGCACCGGC ACTCGCCGAT
ACCGCGCGCA AACAGATCGC CGCATCGGTG CAGGGCGCGG CGAATGCATA CGAGCGGCAG
GCGCTCGTCA GCGAAGGCGC GGACACGCTG ACCGACGCGG GGCTGTACGA CGAATCGGAT
GCGTTGCTGA AGGCCGAGCT GCCGCGTTCG TCCACGCCGT ACTACTTCAT GTCGGGGCTG
GCCGCGAACG CGAAGGCGCG CGGCGACAAG GCGGCCGCGC TCGACTGGTA TCGCAAGGCG
TACGACGCGG CGAGCGGCCC GGCGACGAAG CTGCGCTGGG GCGCGACCTA CTTCGCGAAT
GCGGTTGAAC TGGCGCCGGA CGATTCGGCG CGCATCGAAG GAATTGCCGC CAGTGTGCTC
GCGCAGGCCG ACAAGACCCG GGACGCGTTC TACGGCGCGA ACCTGCGCGC GCTGACCAAG
GTCGTCACGC AGCTGAACCG CTGGCGCGGC AGCGGCGCGC ACGATGCGTC GGTCAGGTCG
GTCGTCAAGC AGTTCGACGG CGTGTGCGGG AAACTGCCGG CCGGCGATCC GCAGGCGGCG
GCATGCACGA AGCTGATCCA GCCCGTGAAG GCGTAA
|
|---|
| Protein sequence | MKTVLRNLTA ACLFVAAGAA LAAATPAGAP VASASPDGAH LPPGIAWQHG DVDAAFALAK
REGKPLLLYW GAVWCPSCNQ VKSTIFSQQA FKTRSSFFVP VYLDGDTESA QKLGERFKVH
GYPTMILFRP DGTEVTRLPG EADLDRYMQA LSLGMTAAHP VRQTLATALK NGASLTPDEW
RLLADYSWDT DGALPVPADR VAETLQSLAQ RARAAGAKAE SARFALKSAV VAASDDPTQA
GALDKAALAD SLRTVLHDAA LSRADSDVLV AAPARVVAYL GGDDAQRSKL RGAYDTALAR
LSTDTTLSSI DRLMALHGRV LLARGDARKG TPLAAPALAD TARKQIAASV QGAANAYERQ
ALVSEGADTL TDAGLYDESD ALLKAELPRS STPYYFMSGL AANAKARGDK AAALDWYRKA
YDAASGPATK LRWGATYFAN AVELAPDDSA RIEGIAASVL AQADKTRDAF YGANLRALTK
VVTQLNRWRG SGAHDASVRS VVKQFDGVCG KLPAGDPQAA ACTKLIQPVK A
|
|---|
| |