Gene Bcenmc03_4713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4713 
Symbol 
ID6127525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1727967 
End bp1729160 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content72% 
IMG OID641651800 
Productmajor facilitator transporter 
Protein accessionYP_001778333 
Protein GI170737073 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.800868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCG CCGTACCCGA TCAGGCCGCC GCACGCCGCG TGCTCGCCGC GACCTGCGTG 
AGCTACATGC TCGTGCTGCT CGATGCGTCG ATCGTCAACG TCGCGCTCAC CGACATCGCG
CACACGTTCG GCAGCCGCGT GGCCGGTCTG CAATGGATAG TGAACGCTTA CACGCTCGCG
TTCGCGAGCC TGTTGCTGAC GGGCGGCACG CTCGGCGACC GGCTCGGCGA TCGCACCGTC
TATGTGGCGG GGCTGGCCGT CTTCGTCACC GCGTCGGCCC TGTGCGGCGT TGCGCCGACC
TTGCCGGCGC TCGCGGTCGC CCGCGCGTTG CAAGGCGTCG GCAGCGCGAT GCTGGTGCCC
TGCTCGCTGG CGCTGATCAA TCGCGCGTTC CCCGAACCGG CCGCGCGCGC ATCGGCGATC
AGCGTGTGGA TGGGCTGCGG CGGCATCGCG ATGGCGTCGG GTCCGCTGAT CGGCGGCTTG
CTGATCGATC TGTCCGGATG GCGCAGCCTC TTCTTCGTGA ACCTGCCGCT CGGGCTCGCC
GGCATCTGGC TCGGCCGAAC GGTCGCGCCC GCCGCCGTCG ACCGGTCGCG GCAGTTCGAC
TGGGGCGGCC AGGCGGCGGC CATCGTCGCG ATCGGGGCGC TGATCGGCAC GCTGATCGAA
GGCCCGTCGC TCGGCTGGCG CTCGGCGCCG ATCGTCGGCG GCGCGGTGGC CAGCGTCGTC
GCGTGGATCG CGTTCATCGC GATCGAGGCG CGGCGCCGCG AACCGATGCT GCCGCTCGCG
TTCTTCCGCA ACCGGCTGTT CGCCGGATCG ACGTTCGTGT CGATGGCGTC GGCGTTCGTG
TTCTACGGTT TGCTGTTCGT GCTCAGCCTG TTCTATCGGC AGGTTCGCGG CGCCAGCCCG
CTCGATACGG GGCTCGCGTT CCTGCCGATG ACCGCGATGG TCGCGCTCGG CGGCCTCACC
TCGGGACGGA TCGTTGCACG CTTCGGCGCG CGCGGGACGA TGTGCGCGGC GTTCGGGCTC
TACGCGGCGG GCGCGCTCGG GATGACAGCC ATCGGCGCGA CGACGCCCGC GTGGCTTGCG
GTCGCGCCGA TGCTCGCGAT CGGTTTCGCA TCGGGCTCAT CTCACCGGCC GCGACGGCGC
CGGCGCTCGG GACGATCGAC CGGCAGCGCG CCGGCGTGGC GGCAGCCGTG CTGA
 
Protein sequence
MTAAVPDQAA ARRVLAATCV SYMLVLLDAS IVNVALTDIA HTFGSRVAGL QWIVNAYTLA 
FASLLLTGGT LGDRLGDRTV YVAGLAVFVT ASALCGVAPT LPALAVARAL QGVGSAMLVP
CSLALINRAF PEPAARASAI SVWMGCGGIA MASGPLIGGL LIDLSGWRSL FFVNLPLGLA
GIWLGRTVAP AAVDRSRQFD WGGQAAAIVA IGALIGTLIE GPSLGWRSAP IVGGAVASVV
AWIAFIAIEA RRREPMLPLA FFRNRLFAGS TFVSMASAFV FYGLLFVLSL FYRQVRGASP
LDTGLAFLPM TAMVALGGLT SGRIVARFGA RGTMCAAFGL YAAGALGMTA IGATTPAWLA
VAPMLAIGFA SGSSHRPRRR RRSGRSTGSA PAWRQPC