| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4688 |
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| Symbol | |
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| ID | 6127504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 1692696 |
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| End bp | 1695206 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641651779 |
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| Product | hypothetical protein |
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| Protein accession | YP_001778312 |
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| Protein GI | 170737052 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000356334 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000000739764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCCAAAAA TGAGCAAGAT CAGCGTTGCA ATTTTTCTTG CCATTGGTGC GCTGTGCCAA
CAGGGCGCGT TCGCGCGTGG AGGGGTTGCC GGCTCGGGAG CGGACCTGTT CGAGCAGGCG
GAGCAGCTTC CGGCGGATTT TCTCGAGCAA CTGTTCGATT CGCCGCTGGT TGTGCGCATC
GATTTTGATG GCCATTCGGC AGGCGAGGGC ACGATCACGT TGAGTCGCGA TGGAAAGGTT
CAGTTGGTTG CACTCTCGGA TGAGCGGCGC AACGACATCG AACAGGGCGA TCGCGAGCTG
ATCGAAAAAT TTCTCCGTGA GCCGCGTGCG CTCGGCGCCT GCGAGACCAA CTGCGACGGT
GTGCTCGCGC TTCACTACAA CCTCCAGGAC TCCGTTTTAT CCATCGTGAC GCGCCGTGTG
GAACAGGATG GTGAGCAGAA GAAGTATCAC CCGCTGCCGG CCAGCGGAAG TACCGGCCTG
ATTGCGTACA ACTACCTGAA TCTCACGGGC GGTCAAGGCC GTGAAATCGG AGGGCGGTAT
TCGTTTGACG CCATCGGTAG CGTGGGAAAC TGGTCCATCA CGACCGGATT GCAGGCGACG
CAGAACCGCG GCATGCGGCG AGCCAGCGAG ATTGAATACT CGGTGCCCCG CCTGTACGCG
CAGCGCGAAT TCGAGGGCAA ATTCGCGCGC GCAGGTTTCT TTACGCCGGA CCTGGCAACG
GGTATCCGGC CTCCGCGCAT GCCAGGCGGA GGCGCGGCGA CCACACTTGG GGTGATGTTT
GGCACGTCCG AGGCGCGCGA GGTCGAAGGC GCGCGCCCGA GCCTCTATCC CGTCTATGTG
ACCGCCAATC GCCAGGGCAT GGTCGAAATC TACCGCAATG GCGCGTTGAT CCACAGCCAA
GCGGTGCAAC CGGGGCTGCA GGTGGTCGAT ACGCGCCCGC TACCCAGCGG CATCTATGAA
GTGGAGGTCC GGCTCGTTGA AGATGGTCAA GTTACGTCCA CGCAGCACGA GCTCGTCTAC
AAGCCCGCGG CGTGGAGCGA TCCCACACAA CGGTGGAAGT ACGCATTTTT TGCTGGACAG
GAACGCAACC TGATCGGCGA GGATCGCTCG CACGCGTTCA CCGCGGGTGG CGCGATCAAC
TACCTCGCCC ATCCTCGGGT CGTGCTCGGT GCGTCGGCTC AGCATGTGGC CGACGCCAAC
GTGTTCGGCG CGTCGCTGGA CTGGCAGTTT ACGGACCGCG CGCGAACCTA CTGGAATGTG
TACCACTCCT CGAAGCACGG AGTCGGCGGC GATGTGCAGA TCCTGATGCC GTACCGGGAC
GGGAGCGTAT CGCTGAGCCA CAGCCAGCGC TGGCAACGCA GCGACCGGCG CCATCGGAAT
GGGCGCTCGA GCGTGCGCAG CGGCAAGGTG CAGGACTCGG CGATTACGTG GAGCCATCGC
TTCACGCCGC AAACGAGCAT CATGTCGCGC GCTTCATACG CCAGCGGCGC GACGACCGGC
CTCGGTGTCG ACCTGTCAGT TTCGCATCGA CATAGTTTGT TCGGCAACGA TCTCACTTGG
CGTGTGTCCG GCTTCGATCG CCCCACCGGG ACGTTGGCGA GAACTCGCAA CCGAGGCGTC
GATCTTGGCT TGAGTATTGC GCTCGGCAAG GAAAAACGCA GTTACAACGT GAACCTCGGA
ACGCGAAGCG GCTCGGATGG CCAGCGTGAT CATTATGCGT CGCTGGGCGT ACGGCAGGAG
CTCGACGCTG GCTTCTTCAA GTCGGTGGGG GCGAATGGAA CCGTCGACCG GTATGGCTTG
AGCATGGGTG CCACCACGCA GTTCGAACAT TCGGTGGCTC GCGGCGATGC GTTCCTCCAG
CGCTCGTCCA AGGAAGGTGG CATTGCCGGC GGGATGAACC TGTCCAGTAC CGTTGGCACG
AACGGCAAGT CCGCTGCCGT ATCCGGCAAA GGCAACGCCT TCAACGGCGA GTCCGCGGTG
ATTGTGGACC TGGCATCCGA TTTCGAGGAC GTCAAGGTGC ATGCCCAGGA CACCTCGGGC
GGCAGCATTG AACTGCGCCC GGGTCGCAAT CTGGTTCCCG TGTCGGCTTA TCGCGCGGGT
CGACTCCAGT ATTTCTTCGA TCGATCGCAG GCCCCGGCGG CGACGCTGCA GCCGGCCGCG
ACCCATTACC ACCTGAACAA GGGCGGTGTC GGGTACGAGA AGGTACACGT CATGAAGACG
ATGACGGTGA TCGGTCGACT GGTCGACCAT TCAGGCAAGC CGGTGCGAGC AGCTCACCTG
TCCAGCCCCG CGGGTCGGTC GGTCACCGAG GCCGACGGAT TTTTCGCGCT CGAAGTGAGT
CATGCCAAGC CGGTTGTAAA GGTCGAGAAA GGAGGCAAGC CGCTCTGCAC GCTTCACCTG
AAGCCGCAGG ACCATCAAAT GGAAGGTGAC TCTCTGATTG TCGGGGAGTT GGAATGTGAA
CAGGAGCAGA CCAATGCCGA TTCAGGGGAA AGCCGTGATG AACAGGGGTA A
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| Protein sequence | MPKMSKISVA IFLAIGALCQ QGAFARGGVA GSGADLFEQA EQLPADFLEQ LFDSPLVVRI
DFDGHSAGEG TITLSRDGKV QLVALSDERR NDIEQGDREL IEKFLREPRA LGACETNCDG
VLALHYNLQD SVLSIVTRRV EQDGEQKKYH PLPASGSTGL IAYNYLNLTG GQGREIGGRY
SFDAIGSVGN WSITTGLQAT QNRGMRRASE IEYSVPRLYA QREFEGKFAR AGFFTPDLAT
GIRPPRMPGG GAATTLGVMF GTSEAREVEG ARPSLYPVYV TANRQGMVEI YRNGALIHSQ
AVQPGLQVVD TRPLPSGIYE VEVRLVEDGQ VTSTQHELVY KPAAWSDPTQ RWKYAFFAGQ
ERNLIGEDRS HAFTAGGAIN YLAHPRVVLG ASAQHVADAN VFGASLDWQF TDRARTYWNV
YHSSKHGVGG DVQILMPYRD GSVSLSHSQR WQRSDRRHRN GRSSVRSGKV QDSAITWSHR
FTPQTSIMSR ASYASGATTG LGVDLSVSHR HSLFGNDLTW RVSGFDRPTG TLARTRNRGV
DLGLSIALGK EKRSYNVNLG TRSGSDGQRD HYASLGVRQE LDAGFFKSVG ANGTVDRYGL
SMGATTQFEH SVARGDAFLQ RSSKEGGIAG GMNLSSTVGT NGKSAAVSGK GNAFNGESAV
IVDLASDFED VKVHAQDTSG GSIELRPGRN LVPVSAYRAG RLQYFFDRSQ APAATLQPAA
THYHLNKGGV GYEKVHVMKT MTVIGRLVDH SGKPVRAAHL SSPAGRSVTE ADGFFALEVS
HAKPVVKVEK GGKPLCTLHL KPQDHQMEGD SLIVGELECE QEQTNADSGE SRDEQG
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