Gene Bcenmc03_4675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4675 
Symbol 
ID6127491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1679661 
End bp1680386 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content63% 
IMG OID641651766 
Productflagellar basal-body rod protein FlgF 
Protein accessionYP_001778299 
Protein GI170737039 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0039193 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACAATT TCCTCTACAC CGCCATGACA GGCGCTGAGC ATTCGCTGCG CGCGCTCAAC 
GTGCGAGCCA ACAACCTTTC CAACGCGCAG ACCAGCGGCT TTCGTGCCGA TCTCGCCAGT
GTGACGAGTC AGGCAGCCAG GGGGTATGGC TACGACTCGC GTTACCACGC AACGCTCACA
TCGACGCATG TTAATCCCGA GCCGGGCAAG ATCAGCGAAA CGGGTCGCAC GCTCGACGTG
GCCATCGACG GAGGCGGCTA TCTTGCGGTG GAAACCGCTC AGGGCGTGGC ATACACGCGA
GCCGGCGCGC TCACGCTCGA CGGCGACGGC GCACTTACGC TGAACGGTAA TGCCGTATTG
GGGGAAGGCG GTCCGATCGT GCTGCCCGAG CACGACGCGT TGACGATCGG CGCGGATGGC
ACGATCTCCG TAGTGACGGC GGGCGAGAAG GATATTCAGG ACGCGGGTCG CCTGCTGCTG
GTGAACCCGG ATCCGGCCGA CTTGGTGAAG AACGCGCAGG GCCTCATCGT TTCGCGCACC
GGTACCGACT ATGCGGCCGA CGACAGCGTG ACCGTCAAGG GCGGCCATTT GGAAGCCAGC
AACGTGTCGG CCGTCGAAGA AATGATGCAA ACGATGTCGC TCACGCGCTC ATTCGAGATG
CAGATGAAGC TATACAAGGT GGCCGATGAA ATGGCCGATG CCGGCAACCG GCTCATCCGC
GGGTAA
 
Protein sequence
MDNFLYTAMT GAEHSLRALN VRANNLSNAQ TSGFRADLAS VTSQAARGYG YDSRYHATLT 
STHVNPEPGK ISETGRTLDV AIDGGGYLAV ETAQGVAYTR AGALTLDGDG ALTLNGNAVL
GEGGPIVLPE HDALTIGADG TISVVTAGEK DIQDAGRLLL VNPDPADLVK NAQGLIVSRT
GTDYAADDSV TVKGGHLEAS NVSAVEEMMQ TMSLTRSFEM QMKLYKVADE MADAGNRLIR
G