| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4655 |
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| Symbol | fliF |
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| ID | 6127471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 1663201 |
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| End bp | 1664847 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641651746 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001778279 |
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| Protein GI | 170737019 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.702143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.459158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGACCG CAAACGTGCT TGCTCAAGTC AAGGATCACA TTGCGCGCTT CGCGCCTCGT
GGCCATTTCC GATTACCGTC CCCCGCGGCG CTGTCCAAAC TGGCGCCCAT CGTCATCCTG
GCGATTAGCC TGGCCGCGCT GACCATGATG CTGATGCATC GTCAGGACTC GCGCTACAAA
CCACTTTTTG GCTCCCAAGA AGCAGTGGTC GCCGCCGACA TGATGGCCGC GCTGGACGCC
GAAGGCATTC CGTACCGTAT CCACCCGGAC AGTGGCCAGG TGCTGGTGCC GGAGCAGAAG
CTCGGTGCTG CGCGCATGAT GCTGGCCGCC AAGGGCGTGG TAGGCAAATT GCCGGAGGGG
CTGGAGCAGG TGGACAAGAG CGATCCGCTG GGCGTCAGTC AGTTCGTGCA GGACGTCCGT
TTTCGGCGTG GCCTCGAAGG CGAACTGACG CAGAGCATTA TGGCGCTCGA GCCAGTGTCG
TCGGCTCGTG TGCATCTGTC GATTGCCAAG TCGGCGTCAT TCATTCTGGC CGATGGCGAC
AAGAGTTCGG CATCGGTCGT GCTCACGCTC AAGCCCAACC GAAAGCTGAA TAAGGAGCAG
ATTGCCGCGA TAGTCGCGCT GGTAGCGGGC AGCGTGGCAA ACCTAGACCC GGCCCGCGTG
ACGGTGATAG ACCAGTCCGG CAATCACCTG TCCGCGCAAA TCGATCTCGT GTTGGGAAAT
TCTACGCTCG ACAGCGAATT GGGTGCGCAA ATGCGCGAAC AGGTATTGCG CAATATTCGC
GAGTTGCTCA CGCCTGTGTT GGGTGACGGC AACTTTCGCG CGAGCGTTGC TGTCGAGCTG
GACCACGATC GCGTGGAAGA AACCCGCGAG CAATACGGCG AGGCCCCGAA GGTTACACAG
GAAGCGATTC GCGACGAGAA GGACATCGGT CAGGCAGCGT TGGGTGTACC GGGTTCGTTG
TCGAACCGCC CGGCACCGCC GTCGACTGCC AGCATGCCCG AAGCGCCACA CTCGGCCAAG
AACGCGCAGA CACGCCAATA CGCTTACGAC CGCAATGTCG TACAGATCAA GCGCAGTCCC
GTGCGCGTAA AGCGTCTGAA CGTGGCGGTG GTTCTGAACA ACGCCGCCGC GCCCGGCGGT
GGAAAAGCTT GGGCACCCGC GCAACTTGCG CAGGTGGACA CGATCCTGCG CGACGGTTTG
GGAATCGATG CCGACCGTGA CGATGCACTG ACGGTGTCGT CGCTGGACTT CCGCGGCACG
CCGGTGACCG AATCGCAGCC GTGGTGGAAG CAGCCCGACA ACCTCGTGAC GATCGGTACG
TGGGCAGCAT GGGCACTGGG TGCGCTGCTC GGGTTCGTAT TCATCTTCCG CCCGCTGCTT
AAGGTGCTTC GCATTTGGGC TAACGGCGGG CGCGATCCGC TATCTCAGGG CGCCAACGCT
GTGTCCGGCG GTCCGGAAGC CCCGGCGCTT GCGGCAGCCG CCGACGCCGA CACGCAGCCC
CTGCTGCTGG CCGACGCGAA TCTCCCGCCG ATTGGCTCCG GCGCAGACGT GCTGATCGCA
CACCTGAAGC ATCTGGCTGC TCAGGATCCT GAGCGCGTTG CCGAAGTCAT CAAACCCTGG
ATTCGAGACG ATGAGCACAC CAACTGA
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| Protein sequence | MRTANVLAQV KDHIARFAPR GHFRLPSPAA LSKLAPIVIL AISLAALTMM LMHRQDSRYK
PLFGSQEAVV AADMMAALDA EGIPYRIHPD SGQVLVPEQK LGAARMMLAA KGVVGKLPEG
LEQVDKSDPL GVSQFVQDVR FRRGLEGELT QSIMALEPVS SARVHLSIAK SASFILADGD
KSSASVVLTL KPNRKLNKEQ IAAIVALVAG SVANLDPARV TVIDQSGNHL SAQIDLVLGN
STLDSELGAQ MREQVLRNIR ELLTPVLGDG NFRASVAVEL DHDRVEETRE QYGEAPKVTQ
EAIRDEKDIG QAALGVPGSL SNRPAPPSTA SMPEAPHSAK NAQTRQYAYD RNVVQIKRSP
VRVKRLNVAV VLNNAAAPGG GKAWAPAQLA QVDTILRDGL GIDADRDDAL TVSSLDFRGT
PVTESQPWWK QPDNLVTIGT WAAWALGALL GFVFIFRPLL KVLRIWANGG RDPLSQGANA
VSGGPEAPAL AAAADADTQP LLLADANLPP IGSGADVLIA HLKHLAAQDP ERVAEVIKPW
IRDDEHTN
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