| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4652 |
|---|
| Symbol | |
|---|
| ID | 6127468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 1659441 |
|---|
| End bp | 1660184 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641651743 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001778276 |
|---|
| Protein GI | 170737016 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.490614 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACAG TCCCACCCGC CGATGCAAAA AAGCCGCGCA TTGCGCTCCT AGAAGACAAC
GTCGCACATG CGAGAACCGT TCGACACTGG CTCGAGGCTG CGGGCTACGA TGCTATTGTC
GAGTACGACG GCAGACGCTT TATCGACCGC ATCGGCCGCG AGAAGGTCGA TATGCTTTTA
CTCGATTGGG ATGTGCCCGG CATGACCGGC ATCGACGTAC TGATAGACAT GCGCAAGCGG
GTCGACTATC TGATTCCCAT TGTGTTGCTC ACTCAGCATG ACGACGAGCG CGATATCCTG
CACGGCTTGA GCTGCGGTGC AGATGACTAT CTGGTCAAAC CTATCAGCGA GCGAATGTTG
ATTGCTCGCG TTATCGCACA GTTGCGCAAA TGGTACCCGG GGGTCCAGCG CAATCAGCAA
ATCAAATTTT CCGGCTTCAT ACTGGATGAG ACCACGCGCA CGGCGACGTT GCCCGACGGC
GAGCAAGTCG CGCTGCCTGG GCGCGAATTT TCCATCGCGC TGTACCTGTT CGCGCACGCC
GGACGCGTGG TGAGTCGCGA CGTGCTGCTC AAGCAAGTTT GGGGGGCTGC GGATTCGTCG
AATGTCGGCA CGTTGGCAAC CTATATCACA CGGGTGCGAA ACGGCCTTCG GCTGCGACAG
AACGGGCTCA GAATTTCGAG CGTGTATCGC TACGGGTATC GCCTCGAGCG GTTGGCGGAT
GGTGCCGACA ACGACTTGGA TTGA
|
|---|
| Protein sequence | MSTVPPADAK KPRIALLEDN VAHARTVRHW LEAAGYDAIV EYDGRRFIDR IGREKVDMLL
LDWDVPGMTG IDVLIDMRKR VDYLIPIVLL TQHDDERDIL HGLSCGADDY LVKPISERML
IARVIAQLRK WYPGVQRNQQ IKFSGFILDE TTRTATLPDG EQVALPGREF SIALYLFAHA
GRVVSRDVLL KQVWGAADSS NVGTLATYIT RVRNGLRLRQ NGLRISSVYR YGYRLERLAD
GADNDLD
|
|---|
| |