| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4644 |
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| Symbol | |
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| ID | 6127460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 1651139 |
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| End bp | 1653229 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641651735 |
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| Product | type III secretion FHIPEP protein |
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| Protein accession | YP_001778268 |
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| Protein GI | 170737008 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
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| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.207433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.243836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTGA TCGACCTACT CAAGCGCCTG AAGTTTGCTG CGCCTCTCGC CCTGTTCACC
ATCTTGGCGA TGGTAATCCT GCCGCTTCCG CCAGCTGCAT TGGACGTCAT GTTCACGTTC
AACATCGTGC TATCCATTGT GGTGGTAATG GTGGCCGTGA CCGTTAAGCG ACCGCTGGAC
TTCTCGGCCT TCCCGACCGT TATCCTGGCT GCCACGCTGA TGCGCCTGAC ATTGAACGTC
GCATCAACAC GCGTAGTTTT GCTTAATGGC TACACGGGCG CGAGCGCAGC AGGCCAAGTG
ATCGAATCGT TCGCCAATGT AGTGATCGGC AGCAATTTCG TGGTCGGCCT GGTCGTCTTC
GTGATCCTTA TGATCATTAA CTTCGTAGTG GTCACCAAGG GCGCGGAACG CATCTCAGAA
GTGTCGGCGC GTTTCACACT CGACGCGCTG CCCGGCAAGC AGATGGCCAT CGACGCCGAT
CTGAACGCCG GTGTCATCAC GCAGACGCAA GCCCAGCAAC GCCGCAAAGA AGTTACGACC
GAAGCTGACT TTTACGGCGC CATGGATGGC GCATCGAAGT TTGTGCGCGG CGACGCCATC
GCCGGCATTC TGATTCTCAT CACCAACATG ATTGGCGGCG TGATCATCGG CGTACTCATG
CACGGCTTGC CTGCAAGCGA GGCATTCCAC AAGTATGCGC TGCTGGCCAT CGGGGACGGC
CTGGTCGCGC AAATACCCGC CCTGCTGCTG TCCGCCGCCG CCGCGGTAAT CGTCACCCGC
ATCGACGACG CGCGAGACTT CGAGGAGCAG GTCGGCCAGC AGTTGCTCGC TTCGCCGTTG
GTGCTGTTCA GCGCCGCCGC ACTGATGGCC GCGCTGGGCC TGATCCCGGG CATGCCGACA
TTGGTGTTTC TTTGCTTTGC AGCAGTACTC GGTTACGTCG GCTATCGGAT GACGCAGCGT
ACTTCGCCAT CCGCAGCGAT CGAGGCGGAA GAAACCGCCC GCGTCATGCA AGCCACGCTA
GCCGCGCCCG GCAACGAGCC GTTCGACTGG AGCAGCCTGC CGTATGTGGA CGCGCTTTCA
GTATCCCTCG GCTACAAGCT GGTGGAGATG TTGGACCGCG CTCAAGGCGC GCCGCTGGTG
CGCCGCCTGC ATGGCACCCG ACAAACCCTA TCGGAACAAC TCGGCTTCCT GCTACCGCCC
ATCGGCGCGC GCGACGACAT GAGCCTGCCG CCCTCCAGTT ACACCATCAT CCTCAATGGC
ACCACACTGG CTCAGGCCCA AGTGCACCCG GGAAAGCTGA TGGCCATTCC GTCACCGACC
GTCTACGGGG AATTGGATGG TACACCCGAC ATCGACCCTG CCTACGGCAT GCCCGTCACG
TGGATCGAGC CCGACCAGAA GGCCCATGCA CTCGGCCTCG GCTACCAGGT TGTCGATTGC
GCGACGGTAA TCGCCACGCA TGCAGCCAAG TTAATTCGCG AAACGATCCC CGACCTGTTC
AGCTACGACA ATGTAACCGC CATCATCGAA CGCCTGACGG CCATTGCGCC AGTGCTGGCC
GATGCGCTGG GGAAATGCCT CACGCACAGT CAGTTGCGCA AGGTATTCCG TACGTTGTTG
GCCGAGGACG TGTCGATCAA GGACATCGAA ACCGTGTCCG CCACCCTGGT GGAGGCCGCA
GAAACCACCA AGGACCCGCT ACTGCTCGTG GCCGAAGTCC GCTGCGCGCT GCGTCGCCAG
ATCGTGGCAG GACTTGGTGC CCAGCACGAG GCGCTCAAAG GCTTCAGCCT GACGGTGGAA
CTCGAGAACA TTCTGCTGAA TGCCCTAAGT CTCGCGGAGC AATCGGGCAC GCGTGTGCCG
CTGGACAACT TCCCAGTCGA ACCGAACGTG CTCTCACAGT TGCAGACCCA TATGCCGGCG
GTGGTCGAAC AATTGAAACA AATGGGCGTC GCCCCGGTGC TGATCGTGGT GCCACGCATT
CGCCCGATGC TCGCGCGATA CGCCAAACTG TTCTCACCGG ACTTAACCGT CCTGTCATAC
AACGAAGTTC CCGACAACAA GGAAGTCAGC ATTGTCGGCA CGCTCGGATG A
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| Protein sequence | MNVIDLLKRL KFAAPLALFT ILAMVILPLP PAALDVMFTF NIVLSIVVVM VAVTVKRPLD
FSAFPTVILA ATLMRLTLNV ASTRVVLLNG YTGASAAGQV IESFANVVIG SNFVVGLVVF
VILMIINFVV VTKGAERISE VSARFTLDAL PGKQMAIDAD LNAGVITQTQ AQQRRKEVTT
EADFYGAMDG ASKFVRGDAI AGILILITNM IGGVIIGVLM HGLPASEAFH KYALLAIGDG
LVAQIPALLL SAAAAVIVTR IDDARDFEEQ VGQQLLASPL VLFSAAALMA ALGLIPGMPT
LVFLCFAAVL GYVGYRMTQR TSPSAAIEAE ETARVMQATL AAPGNEPFDW SSLPYVDALS
VSLGYKLVEM LDRAQGAPLV RRLHGTRQTL SEQLGFLLPP IGARDDMSLP PSSYTIILNG
TTLAQAQVHP GKLMAIPSPT VYGELDGTPD IDPAYGMPVT WIEPDQKAHA LGLGYQVVDC
ATVIATHAAK LIRETIPDLF SYDNVTAIIE RLTAIAPVLA DALGKCLTHS QLRKVFRTLL
AEDVSIKDIE TVSATLVEAA ETTKDPLLLV AEVRCALRRQ IVAGLGAQHE ALKGFSLTVE
LENILLNALS LAEQSGTRVP LDNFPVEPNV LSQLQTHMPA VVEQLKQMGV APVLIVVPRI
RPMLARYAKL FSPDLTVLSY NEVPDNKEVS IVGTLG
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