Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4629 |
Symbol | |
ID | 6127449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1622724 |
End bp | 1623533 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641651724 |
Product | diaminopimelate epimerase |
Protein accession | YP_001778257 |
Protein GI | 170736997 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000265381 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGATCG CATTTCAGAA GATGAACGCG AATGGCGATG ACTTCGTCAT CGTCGACCTG CGCGGTCACG AACACGATCG CGCGCATCCC GTCGACGGCG ACCTCGTGCG GCGCATGGGC GATCGGCATC GCGGCATCGG CTTCAACCAG CTCGCGGTGA TCTCGGACGG CGACGACGCA GTCGCGCGCG TCGCGTTCTG GAACCCCGAC GGCTCGGCGC TCGATACGTG CGGCAGCGCG ACGCGCGGCG TCGCATGGAA GCTGATGCGG GAAACCGGTG CGACGTCGGT CGTGCTGCGC ACGAATCGCG GGCGCCTGCA CTGTTCGCAG GATGCGGACG GGCTGATCAA GGTCGACATG GGCGCGCCGC GGCTCGGCTG GCAGGACGTG CCGGTCTCGG AGGCCGTCGA CACGCTCGCG CTGCCGCTGC CCGGTGCGCC GGCCGCGTGC AGCATGGGCA ATCCGCACTG CACGTTCTTC GTCGATGATC TCCGCGCGAT CGACGTCGCG ACGCTCGGCC CGACCATCGA AACGCATCCG CTGTTTCCGC TGAAGACCAA CGTGCATTTC GTTCAGGTCA TCGATCGCAT GCATATCCGT CTACGTATCT GGGAACGCGG CGGCGGCGTG CCGCTCGGCT CCGGCTCGTG TTCGTGCGGC GCGGCGGTCA ACGGCATCCG GCGCGGGCTG CTCGACGATA CCGTGCGGGT GACCTGCGAC GGCGGCGACG TCACCGTTCA ATGGGACGGC GCCGGCAGCG TGTTCCTGAG CGGACCCGTG ACGTTCGGGT TCAGCGGGGT GTGGCTGTGA
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Protein sequence | MPIAFQKMNA NGDDFVIVDL RGHEHDRAHP VDGDLVRRMG DRHRGIGFNQ LAVISDGDDA VARVAFWNPD GSALDTCGSA TRGVAWKLMR ETGATSVVLR TNRGRLHCSQ DADGLIKVDM GAPRLGWQDV PVSEAVDTLA LPLPGAPAAC SMGNPHCTFF VDDLRAIDVA TLGPTIETHP LFPLKTNVHF VQVIDRMHIR LRIWERGGGV PLGSGSCSCG AAVNGIRRGL LDDTVRVTCD GGDVTVQWDG AGSVFLSGPV TFGFSGVWL
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