Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4628 |
Symbol | |
ID | 6127448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1621840 |
End bp | 1622727 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641651723 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001778256 |
Protein GI | 170736996 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000267082 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACGCCCG ACGACGCACG AACCTTCGAC GCGCTGCGCC CGCGCCTGCA GAAGATCGCA TACCGGATGC TCGGCTCCGT CGCGGATGCC GAGGACATCG TGCAGGACGT GTGGCTGCGC TGGCACGACG CGGCGCGCGA GCGCATCGAG AACGCCGAGG CGTGGCTCGT CGCGGTCACG ACGCGCACGT CGATCGATCG CCTGCGCGCG GCGAAGCTCC GGCGCGAGCA CTACACGGGT ATCTGGCTGC CCGAGCCGGA ACTCGGCGAA TCGCCCGCGA CGCCCGAGGA AATGACGGAG CGCGCGAACG ACGTATCGGT CGCGTACCTG CTGTTGCTCG AACGGCTGAC GCCGGAAGCG CGCGCGGCCT TCCTGCTGCA TGAAATCTTC GAATTCGACT ACGACCGGAT CGCCGACGCG ATCGGCAAGA GCGAAGCCGC GTGCCGCCAG CTCGTCAGCC GGGCCCGGGC GCGGCTGCGC GACGATACGC AGCCGCGGCA CGCGGTGCCG CACGAAACGC ATCGCCGGCT GCTGCAGACG TTCACGCATG CGCTCGCGCA CGGCGACTTC CCGTCGATCC AGGCGCTGCT CGCCGAAGAC GCGATGCTGA TCGGCGACGG CGGCGGCCAT GTCCAGAGCT TCCCGAAACC GATGGTCGGC GGCCGGCGGA TTGCGCAACT GTTCTATGCG ACGTGGTTGC GCTGCGGCAG CGGTGTCGAG ATGCGGCCGG TCGTGCTGAA CGGCCAGTGG GCGATGCTGC GCTTCATCGA CGGGCAACTC GAAGCGGCGA TGTCGTTCGA GACCGACGGC ACGCGCATCG GCCGGATTCT CGTGCAGCGC AACCCCGACA AGCTCGCGCG GATCGCGGCC GCCTGCACCG CCGGCTGA
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Protein sequence | MTPDDARTFD ALRPRLQKIA YRMLGSVADA EDIVQDVWLR WHDAARERIE NAEAWLVAVT TRTSIDRLRA AKLRREHYTG IWLPEPELGE SPATPEEMTE RANDVSVAYL LLLERLTPEA RAAFLLHEIF EFDYDRIADA IGKSEAACRQ LVSRARARLR DDTQPRHAVP HETHRRLLQT FTHALAHGDF PSIQALLAED AMLIGDGGGH VQSFPKPMVG GRRIAQLFYA TWLRCGSGVE MRPVVLNGQW AMLRFIDGQL EAAMSFETDG TRIGRILVQR NPDKLARIAA ACTAG
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