Gene Bcenmc03_4615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4615 
Symbol 
ID6127435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1609955 
End bp1610851 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content70% 
IMG OID641651710 
Productdihydrodipicolinate synthase 
Protein accessionYP_001778243 
Protein GI170736983 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.330125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00385635 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCCATCC TGTTGAAAGG CATCATTGCC TACCCGGTCA CGCCGTTCTC CGCCGACGGC 
GGCGTCGACC TGACAGCGCT CGATGCGCTG ATCGATCGCC TGATCGCCGA CGGCGTTCAC
GCGATCGCGC CGCTGGGCAG TACCGGCGAA AGCGCGTACC TGTCCGACGC CGAATGGGAG
GCCGTCGCCA CCGCGTCGAT TCGCGCGGTG CGCCGGCGCG TGCCGACCGT CGTCGGAATC
TCCGATCTCA CCACGGCGGG CGCGGTGCGC CGCGCCCGCT TTGCCGAGCA GGCCGGCGCC
GATGCGGTGA TGGTGCTGCC GGTGTCGTAC TGGAAGCTCG GCAACGACGA GATCGTCGCG
CACTACCGTG CGATCGGCGA CGCGATCGGC ATCCCGATCA TGCTGTACAA CAACCCGGCG
ACGAGCGGCG TCGACATGTC GCCCGACCTG ATCGCGACGA TCTGCCGGTC CGTCGACAAC
GTGACGATGG TCAAGGAGAG CACCGGCGAC CTCGGCCGGA TGCACCGGCT CGCGCAGTTG
AGCGACGGCA CGATCCCGTT CTACAACGGC AGCAATCCGA TGGCGCTCGC CGCGCTGGCC
GCCGGCGCGG CCGGATGGTG CACGGCCGCG CCGAACCTGA ATGCCGCGTT GCCGCTCGCG
TTGTTCGACG CGATGCGCAC GGGCGACCTC GCGCGCGCCC GATCGGCCTT TCACGCGCAG
TTGCCGTTGC TGCAGTTCAT CGTCAACGGC GGGTTGCCGG TGACCGTGAA GGCCGGGCTG
AGGCTGCGCG GTTTCGACGC CGGCGAACCG CGGCGGCCGC TGCTGCCGCT CGGCGACGCA
CGCATGCGCG AACTCGAGCG GTTGCTCGCG GCGCTGCCGG ACGGTGTGGC GGCATGA
 
Protein sequence
MSILLKGIIA YPVTPFSADG GVDLTALDAL IDRLIADGVH AIAPLGSTGE SAYLSDAEWE 
AVATASIRAV RRRVPTVVGI SDLTTAGAVR RARFAEQAGA DAVMVLPVSY WKLGNDEIVA
HYRAIGDAIG IPIMLYNNPA TSGVDMSPDL IATICRSVDN VTMVKESTGD LGRMHRLAQL
SDGTIPFYNG SNPMALAALA AGAAGWCTAA PNLNAALPLA LFDAMRTGDL ARARSAFHAQ
LPLLQFIVNG GLPVTVKAGL RLRGFDAGEP RRPLLPLGDA RMRELERLLA ALPDGVAA