Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4609 |
Symbol | |
ID | 6127429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1604524 |
End bp | 1605387 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641651704 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001778237 |
Protein GI | 170736977 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.46805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000318313 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAATAGAC CCCTGTTCGA CATCGACCTG CTGCGCGCGC TCGTGATGGT CGCCGATTGC GGCAGTTTCA CGACCGCTTC CGCGCGCCTG CATTCGACAC AGTCGACGGT CAGCCAGAAG GTACGCCGGC TCGAGGAAAT CGCCGGCCAC CGCCTGCTCG ATCGCGGCGC GCGCGACGTG CGGCCGACCG ACGCGGGCGT GACGGTGCTC AGCTATGCGC GGCGCATGCT CGCGCTGAAC GACGAGATGC TGGAGGCGCT GTCGGGCGCG ACGGTCGCGC TGACGATCCG GCTCGGCGTA CCCGACGATT TCGCGGCGGG CCGCACGACG CACGCGCTCG CGGCATTCAA GCGCGAGCAT CCGCAGGTGA AGCTCGAAGT GACGTGCGGG CTGAGCCGCG ACATCAGCGC CGCGTACGAT CGCGGCGAAC TCGACCTCGT GCTGATCAAG CAGCGGCGCG ACAGCCGCGA GGCGGTCGTG CGCTGGCCGG AGAAGCTGCG CTGGATCGAC AGCGCGAAGC ATCCGTCGAT CGATCTCGAC CCGGTGCCGA TCGTCGTGTT CCCGCCGCGC GGGCTCTATC GCGACGACAT GATCAAGGCG ATCGAGGAGC GCGGCCGCCG CTGGCGGATC AGCTTCACGA CGTCGAGCCT GAGCGGCATC CAGGCGGCCG TCGCGGACGG GCTCGGCATC AGCGTGCTGC CCGCGCGCGT GGTGACGGGC GAGCACGTGG TGCTGACCGC GAAGCAGGGC TTCGCGCCGA TCGAGCACAT GGACATCGCG ATCCTGCACC GGCCGATGGC CGATCCGATG GTCAGCGCGC TGACGAAGGC GCTCGCGGCG ATGCTCGAAC TCGAAGAGCG GTAG
|
Protein sequence | MNRPLFDIDL LRALVMVADC GSFTTASARL HSTQSTVSQK VRRLEEIAGH RLLDRGARDV RPTDAGVTVL SYARRMLALN DEMLEALSGA TVALTIRLGV PDDFAAGRTT HALAAFKREH PQVKLEVTCG LSRDISAAYD RGELDLVLIK QRRDSREAVV RWPEKLRWID SAKHPSIDLD PVPIVVFPPR GLYRDDMIKA IEERGRRWRI SFTTSSLSGI QAAVADGLGI SVLPARVVTG EHVVLTAKQG FAPIEHMDIA ILHRPMADPM VSALTKALAA MLELEER
|
| |