Gene Bcenmc03_4609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4609 
Symbol 
ID6127429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1604524 
End bp1605387 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content69% 
IMG OID641651704 
ProductLysR family transcriptional regulator 
Protein accessionYP_001778237 
Protein GI170736977 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.46805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000318313 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAGAC CCCTGTTCGA CATCGACCTG CTGCGCGCGC TCGTGATGGT CGCCGATTGC 
GGCAGTTTCA CGACCGCTTC CGCGCGCCTG CATTCGACAC AGTCGACGGT CAGCCAGAAG
GTACGCCGGC TCGAGGAAAT CGCCGGCCAC CGCCTGCTCG ATCGCGGCGC GCGCGACGTG
CGGCCGACCG ACGCGGGCGT GACGGTGCTC AGCTATGCGC GGCGCATGCT CGCGCTGAAC
GACGAGATGC TGGAGGCGCT GTCGGGCGCG ACGGTCGCGC TGACGATCCG GCTCGGCGTA
CCCGACGATT TCGCGGCGGG CCGCACGACG CACGCGCTCG CGGCATTCAA GCGCGAGCAT
CCGCAGGTGA AGCTCGAAGT GACGTGCGGG CTGAGCCGCG ACATCAGCGC CGCGTACGAT
CGCGGCGAAC TCGACCTCGT GCTGATCAAG CAGCGGCGCG ACAGCCGCGA GGCGGTCGTG
CGCTGGCCGG AGAAGCTGCG CTGGATCGAC AGCGCGAAGC ATCCGTCGAT CGATCTCGAC
CCGGTGCCGA TCGTCGTGTT CCCGCCGCGC GGGCTCTATC GCGACGACAT GATCAAGGCG
ATCGAGGAGC GCGGCCGCCG CTGGCGGATC AGCTTCACGA CGTCGAGCCT GAGCGGCATC
CAGGCGGCCG TCGCGGACGG GCTCGGCATC AGCGTGCTGC CCGCGCGCGT GGTGACGGGC
GAGCACGTGG TGCTGACCGC GAAGCAGGGC TTCGCGCCGA TCGAGCACAT GGACATCGCG
ATCCTGCACC GGCCGATGGC CGATCCGATG GTCAGCGCGC TGACGAAGGC GCTCGCGGCG
ATGCTCGAAC TCGAAGAGCG GTAG
 
Protein sequence
MNRPLFDIDL LRALVMVADC GSFTTASARL HSTQSTVSQK VRRLEEIAGH RLLDRGARDV 
RPTDAGVTVL SYARRMLALN DEMLEALSGA TVALTIRLGV PDDFAAGRTT HALAAFKREH
PQVKLEVTCG LSRDISAAYD RGELDLVLIK QRRDSREAVV RWPEKLRWID SAKHPSIDLD
PVPIVVFPPR GLYRDDMIKA IEERGRRWRI SFTTSSLSGI QAAVADGLGI SVLPARVVTG
EHVVLTAKQG FAPIEHMDIA ILHRPMADPM VSALTKALAA MLELEER