Gene Bcenmc03_4605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4605 
Symbol 
ID6127425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1600361 
End bp1601011 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content68% 
IMG OID641651700 
Product17 kDa surface antigen 
Protein accessionYP_001778233 
Protein GI170736973 
COG category[S] Function unknown 
COG ID[COG3134] Predicted outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.109506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000338876 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGCGCA TGCCTTCCAC GAAGACCGTT CTGTTCGCCT CGCTCGTCGC CGTGGCGGCG 
CTTCCGCTCA CTGCCTGCGT CGCGCCGGGC TACTACGGCG CGCAGCCGGG CTATCCGCAA
CAGCAGCAAT ACGCGACGCC CGGCTATGGG CAGCCCGCGT ACTCGCAACC GGGCTACGTG
CAGCAGCAAC CGGCGTATCC GAACCAGGCG CCGCAGCCGT ACGATCAATA CGGCAACCCG
TCGCAATACG GCTCGCAGCC GTATGACCAG TACGGCAATC AGCAACAGCA ATACGCGACG
CCGTACGGCA CGCAATACGG CACCGTGTCG AACATCCAGC CGGTCAACGG CTCGGTCGCC
CCGTCAGGCA TCGCCGGCAC CGTCGTCGGC GCGCTGGTCG GCGGGCTGGT GGGCAACCAG
TTCGGCCGCG GTCACGGCCG CGATGCAGCG ACCGTGATCG GCGCGCTCGG CGGGGCGGTG
GCGGGCAACC AGATCGGCCA GCAGATGGGC GCCGCGCAAG GCCCGAGCAG CTATCGGATC
GACGTGCAGG TGAGCGACGG CTCGATGCGC TCGTTCGACG TGCAGTCGCC GGGCAACCTG
CGTCCGGGCG ACCGCGTGCA GATCAACGGC AATCAGCTGT CGCGCTATTG A
 
Protein sequence
MMRMPSTKTV LFASLVAVAA LPLTACVAPG YYGAQPGYPQ QQQYATPGYG QPAYSQPGYV 
QQQPAYPNQA PQPYDQYGNP SQYGSQPYDQ YGNQQQQYAT PYGTQYGTVS NIQPVNGSVA
PSGIAGTVVG ALVGGLVGNQ FGRGHGRDAA TVIGALGGAV AGNQIGQQMG AAQGPSSYRI
DVQVSDGSMR SFDVQSPGNL RPGDRVQING NQLSRY