| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4597 |
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| Symbol | |
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| ID | 6127418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 1590936 |
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| End bp | 1592084 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641651693 |
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| Product | porin |
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| Protein accession | YP_001778226 |
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| Protein GI | 170736966 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000189593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGACGA AGACAAGGAA CGGCCTGCTG GCCGCCGGCG CGTGCTGCGC GCTTGCCGCG
CCGGGCGCGC ACGCGCAGTC GAGCGTGACG CTGTACGGGA TCATCGATAC GGGCGTCGAA
TTTGTGTCGC ACGCGAACGC GGCCGGCGAT CACGTGGTGC GGATGCCGGG CGTGACGGGT
GAGCTGCCGT CGCGCTGGGG GCTGCGCGGC ACCGAGGATC TCGGCGGCGG CTATCAGGCG
GTGTTTACGC TCGAAAGCGG CTTCAACGTG CGCGGCGGCG ATCTCGGGCA GGGCGGCCGG
CTGTTCGGGC GGCAGGCGTT CGTCGGGCTG AAGAGCGGCT TCGGCACGCT CGCGTTCGGC
CGCCAGTACA CGATGACGTA CCTCGCGCTG CAGGGCGCGG ACATCATCGG CCCCGACATC
TACGGGCTCG GCTCGTTCGA CGCGTACGTG CCGAACGGCC GCGCCGACAA CGCGGTGACC
TACCTCGGCA CGTATCGCGG CGTGACGCTC GGCGCCGCCT ATTCGTTCGG CCGCGACGGC
GCGGGCACCG GCAATTCGCC GGGGCAGGGC ACGTGCGCGG GGCAGGTGCC GGGCGACGCG
GTGCAGTGCC GCAACTGGTC GGTGATGCTC AAGTACGACA GCGCGTACTT CGGTGCGGCG
GCGTCGTACG AGGAACAGCG CGGCGGCACC GGCGCGGCCG CCAACTTCTT CGACGGCGTG
GCGCCCGTTC CCTTCACGAG CAGCGGCGGC AAGGATGCGC GCACGCACGT GAGCGCGTAT
GCGCAGGCGG CCGGCGCGAA GATCGGCGCG GGCTGGATCG GGCGGCGCGT GTCGACCGGT
TCGCCGGCCG CGGCGGGTGC GCATTCCGAC CTGTTCTTCG TCGGCGCGTC GTATGCGGTG
AAGCCCGATT TCATCGTCGA CGGCGAAGGC TACCGCATCG TCAACAGCGC GCACGACACG
CGCGCGACGA TGGCCACGCT GCGCGCGACC TATCTGCTGA CCAAGCGCAC GGCTGTCTAC
GCGCAATCGT CGTATCTGTG GAACAGCGAG CATGCGCGCT ACTCGGTCAG CGGCGGCGGG
CCCGGCACGA CGCCCGGCGC GGGGATGGGG CAGCTTGGCG CGATGGTCGG CATGCGGCAC
ATGTTCTGA
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| Protein sequence | MKTKTRNGLL AAGACCALAA PGAHAQSSVT LYGIIDTGVE FVSHANAAGD HVVRMPGVTG
ELPSRWGLRG TEDLGGGYQA VFTLESGFNV RGGDLGQGGR LFGRQAFVGL KSGFGTLAFG
RQYTMTYLAL QGADIIGPDI YGLGSFDAYV PNGRADNAVT YLGTYRGVTL GAAYSFGRDG
AGTGNSPGQG TCAGQVPGDA VQCRNWSVML KYDSAYFGAA ASYEEQRGGT GAAANFFDGV
APVPFTSSGG KDARTHVSAY AQAAGAKIGA GWIGRRVSTG SPAAAGAHSD LFFVGASYAV
KPDFIVDGEG YRIVNSAHDT RATMATLRAT YLLTKRTAVY AQSSYLWNSE HARYSVSGGG
PGTTPGAGMG QLGAMVGMRH MF
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