| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4586 |
|---|
| Symbol | |
|---|
| ID | 6127407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 1577124 |
|---|
| End bp | 1578053 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641651682 |
|---|
| Product | dihydrodipicolinate synthetase |
|---|
| Protein accession | YP_001778215 |
|---|
| Protein GI | 170736955 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00115595 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACATCGA GCAGCACGCC GCGCCATCGC GGCATTTTTC CCGTCGTTCC GACGACGTTT
ACCGATACCG GCGAGCTCGA CCTCGCGAGC CAGAAGCGCG CGGTCGATTT CATGATCGAC
GCCGGCTCGG ACGGGCTGTG CATCCTCGCG AACTTCTCCG AGCAGTTCGC GATCACCGAC
GACGAACGCG ACGTGCTCAC GCGCACGATC CTCGAGCACG TGGCCGGCCG GGTGCCGGTG
ATCGTCACGA CGTCGCACTA CAGCACGCAG GTGTGCGCGG CGCGCAGCCT GCGCGCGCAG
CAGCTCGGCG CTGCGATGGC GATGGCGATG CCGCCGTACC ACGGCGCGAC GTTCCGCGTG
CCCGAAGCGC AGATCTTCGA TTTCTTCGCA CGCGTGTCGG ATGCGATCGA CATCCCGATC
ATGATCCAGG ATGCGCCCGC GAGCGGCACC GCGTTGTCCG CGCCGTTCCT CGCGCGAATG
GCTCGCGAGA TCGAGCAGGT CGCGTACTTC AAGATCGAGA CGCCGGGCGC CGCGAACAAG
CTGCGCGAGC TGATCCGGCT CGGCGGCGAC GCGATCGAGG GGCCGTGGGA CGGCGAGGAG
GCGATTACGC TGCTCGCCGA TCTCCACGCG GGCGCCACCG GTGCGATGAC GGGCGGCGGC
TTCCCGGACG GCATCCGGCC GATCCTCGAA GCGTTCCGCG AAGGCCGGCA CGACGATGCG
TTCGCGCATT ACCAGGCATG GCTGCCACTG ATCAATCACG AGAACCGCCA GTCCGGGATC
CTCACCGCGA AGGCGCTGAT GCGCGAAGGC GGCGTGATCG CGTGCGAGCG GCCGCGGCAT
CCGATGCCGG AACTGCACCC GGACACGCGC GCGGAATTGC TCGCGATCGC GCGCCGGCTC
GATCCGCTCG TGCTGCGCTG GGCGCGCTGA
|
|---|
| Protein sequence | MTSSSTPRHR GIFPVVPTTF TDTGELDLAS QKRAVDFMID AGSDGLCILA NFSEQFAITD
DERDVLTRTI LEHVAGRVPV IVTTSHYSTQ VCAARSLRAQ QLGAAMAMAM PPYHGATFRV
PEAQIFDFFA RVSDAIDIPI MIQDAPASGT ALSAPFLARM AREIEQVAYF KIETPGAANK
LRELIRLGGD AIEGPWDGEE AITLLADLHA GATGAMTGGG FPDGIRPILE AFREGRHDDA
FAHYQAWLPL INHENRQSGI LTAKALMREG GVIACERPRH PMPELHPDTR AELLAIARRL
DPLVLRWAR
|
|---|
| |