Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4585 |
Symbol | |
ID | 6127406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 1575256 |
End bp | 1577007 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641651681 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_001778214 |
Protein GI | 170736954 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00139321 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCGGCAA CAAAACCCAG GCTGCGCTCC GCCCAATGGT TCGGCACGAA CGACAAGAAC GGCTTCATGT ACCGGAGCTG GATGAAGAAC CAGGGCATTC CCGATCACGA ATTCGACGGC CGGCCGATCA TCGGCATCTG CAACACGTGG TCCGAACTGA CGCCGTGCAA CGCGCACTTC CGCAAGCTCG CCGAGCACGT GAAGCGCGGG ATCTCGGAAG CGGGCGGCTT CCCGGTCGAG TTCCCGGTGT TCTCGAACGG CGAATCGAAC CTGCGGCCGT CGGCGATGCT CACGCGCAAC CTCGCGTCGA TGGACGTCGA GGAAGCGATC CGCGGCAACC CGATCGACGC GGTCGTGCTG CTCGCCGGTT GCGACAAGAC GACGCCCGCG CTGCTGATGG GCGCGGCAAG CTGCGACGTA CCGGCGATCG TCGTGTCGGG CGGCCCGATG CTGAATGGCA AGCTCGAGGG CAAGAACATC GGTTCGGGCA CGGCCGTGTG GCAGCTGCAC GAAGCGCTGA AGGCCGGCGA GATCGACGTG CATCACTTCC TGTCGGCCGA AGCCGGGATG TCGCGCTCGG CCGGCACCTG CAACACGATG GGCACCGCGT CGACGATGGC GTGCATGGCC GAGGCGCTCG GCGTCGCGCT GCCGCACAAC GCGGCGATTC CGGCCGTCGA CTCGCGCCGC TACGTGCTCG CGCACATGTC GGGCATCCGC ATCGTCGAGA TGGCGCTCGA AGGGCTCGTG CTGTCGAAGA TCCTGACGCG CGCGGCGTTC GAGAACGCGA TCCGCACGAA CGCGGCGATC GGCGGCTCGA CCAACGCGGT GATCCACCTG AAGGCGATCG CCGGGCGCAT CGGCGTGCCG CTCGAACTGG AAGACTGGAT GCGCATCGGC CGCGACACGC CGACGATCGT CGACCTGATG CCGTCGGGGC GCTTCCTGAT GGAGGAGTTC TATTACGCGG GCGGGCTGCC GGCCGTGCTG CGCCGGCTCG GCGAAGGCGG GCTGCTGCCG CATCCGGATG CGCTCACGGT GAACGGCAAG TCGCTGTGGG ACAACGTGCG CGAAGCGCCG AACTACGACG ACGAGGTGAT CCGCCCGCTC GACCGGCCGC TGATCGCGGA CGGCGGCATC TGCATCCTGC GCGGCAATCT CGCGCCGCGC GGCGCGGTGC TGAAACCGTC GGCGGCGAGC CCCGAACTGC TCAAGCATCG CGGCCGCGCG GTGGTGTTCG AGAACCTCGA CCACTACAAG GCGACGATCA ACGACGAAGC GCTCGACATC GATGCGAGCT CGGTGATGGT GCTGAAGAAC TGCGGGCCGC GCGGCTATCC GGGCATGGCC GAGGTCGGCA ACATGGGGCT GCCGCCGAAG CTGCTGCGCC AGGGCGTGAA GGACATGGTG CGGATTTCCG ACGCACGGAT GAGCGGCACC GCGTACGGCA CCGTGGTGCT GCACGTCGCG CCGGAAGCGG CCGCCGGCGG CCCGCTCGCC GCGGTGCGCA ACGGCGACTG GATCGAGCTC GACTGCGAGG CCGGCACGCT GCACCTGGAC ATTACGGATG AGGAACTGCA ACGCCGCCTG TCGGACGTCG ATCCGACCGC GGCGCCGGGC GTGGCCGGCC AGCTCGGCAA GGGCGGCTAC GCGCGGCTGT ATATCGATCA CGTGCTGCAG GCCGACGAGG GGTGCGACCT CGACTTCCTG GTCGGCACGC GCGGCGCGGA CGTGCCGAGC CATTCTCATT GA
|
Protein sequence | MSATKPRLRS AQWFGTNDKN GFMYRSWMKN QGIPDHEFDG RPIIGICNTW SELTPCNAHF RKLAEHVKRG ISEAGGFPVE FPVFSNGESN LRPSAMLTRN LASMDVEEAI RGNPIDAVVL LAGCDKTTPA LLMGAASCDV PAIVVSGGPM LNGKLEGKNI GSGTAVWQLH EALKAGEIDV HHFLSAEAGM SRSAGTCNTM GTASTMACMA EALGVALPHN AAIPAVDSRR YVLAHMSGIR IVEMALEGLV LSKILTRAAF ENAIRTNAAI GGSTNAVIHL KAIAGRIGVP LELEDWMRIG RDTPTIVDLM PSGRFLMEEF YYAGGLPAVL RRLGEGGLLP HPDALTVNGK SLWDNVREAP NYDDEVIRPL DRPLIADGGI CILRGNLAPR GAVLKPSAAS PELLKHRGRA VVFENLDHYK ATINDEALDI DASSVMVLKN CGPRGYPGMA EVGNMGLPPK LLRQGVKDMV RISDARMSGT AYGTVVLHVA PEAAAGGPLA AVRNGDWIEL DCEAGTLHLD ITDEELQRRL SDVDPTAAPG VAGQLGKGGY ARLYIDHVLQ ADEGCDLDFL VGTRGADVPS HSH
|
| |