| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4565 |
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| Symbol | |
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| ID | 6127387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 1554040 |
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| End bp | 1555605 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641651662 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001778195 |
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| Protein GI | 170736935 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.267028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0465187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAA CCGACTACGC AATGCCCAGC GAATCCGGCC TGACGAGCCG TGTCGCCGCT
CATCTGCGCC GGTTCCTCCT GCCGCACCTG ATCTTCTATA CGGGGCTGCT GATCGCGCTG
ATCCTGCTGC TCCTGTGCGG GATCGTGCTG TACGAAGGCC GCATCGATGC GCGCGACCGC
TCGCGCAGCA TGCAGCAGAA CCTCGCGCTG ATGGCGTCGT GGGACATCGA GCGCAACATC
GAGATCTATT CGCTGTCGCT GCAGGCGGTC GTCGAAGGCG AGAACGACCC TGAGGTGGTC
AAGCTGCCGA TGCCGCTGCG CCGTCAGGTG CTGTTCGACC GCGCGACGAC GGCCAAGTAC
CTCGGCGGCA TCTATGTGCT CGACGCGAAG GGCGACATCT CGGTCGACGG CAAAAGCGAC
GTGCCGCGCA GGGCCAACTT CGGCAACGAG CCGTACTTCA CCGTGCATCG CGACCACGCC
GACGTCGGCC TGTACGTCAG CCCTCCGTAT CATTCGCGGC TGCGCGGCGG CTCGCCGAGC
ATCGCGCTCA GCCGGCGGAT CACGCGGCCC GACGGGTCGT TCGGCGGCGT CGCGGTGATG
TCGATCCGGC TCGAATATTT TCAGAACCTG TTCTCGCGCC TGTCGCTCGG CGATCGCGGT
TCGGTTGCGC TGATCAACAC GGACGGCAGG ATGGTCGCGC GCGAGCCGTA CGACCCCAAG
ATCGTCGGCC GCGACATCAG CCGCGCGAGC ACGTTCCGGC AGTTCATGAC GGCCAACGAA
GGCAGCTTCG CCGATACCGC ATCGATCGAC GGCGTGCGAC GCCTGTACGT GTTCCGGCAC
CTCGACGGCC TGCCGCTCAT CGTCATGGTC GCGCGCTCGG AAGCGGACAC CTACGCTGCG
TGGTACGACC GTGCGATCCC GATCGGCTCC GCGATGGTCT TGCTCGCGAT CGGCTTCGTC
GGCCTGTCGC TGCTGCTCGA CGTGCAGCTG CGCAAGCGCC ACCGCGCGGA AACCGAGCTG
CAGGCGCTCG CGCGCACCGA CGGCCTGACG GGCCTCGACA ACCGCCGGAT GCTCGACGTC
ACGCTCGCGC GCGAATGGCG CCGCGCCGCA CGTTCGCAAC ATGCGCTGTC GCTGCTGTTC
ATCGACGTCG ATTACTTCAA GCACTACAAC GACACGCAGG GCCACCAGGC CGGCGACGAC
GCGCTCGCCG CGGTCGGCCA CTGCATCGCC GGCTGCCTGC GTCGGCCGGC CGACTATGCG
GCGCGCTACG GCGGCGAGGA ATTCGTCGTG GTGCTGCCGG ACATCGACAC GGACGGCGCA
GTGACGATCG CCGAAACGAT CCGCACGGGC ATCCTCGATC TCGGCATCCG GCACGACGCC
GGCACGGTCG GCCGGCTGAC GGTGAGCATC GGCGTGACGA CCAGCTATCC GGAGCGCGAC
GACAACATCC AGGCCGCGCT GAAGCTGGCC GACGAGGCGT TGTACCGGGC GAAGGAAGGG
GGGCGCAACC GCATCGTCGT ACAGGCGGCC ACGTCGCCGG ACGATCTCGA ATCGCGGCAG
GCCTGA
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| Protein sequence | MAETDYAMPS ESGLTSRVAA HLRRFLLPHL IFYTGLLIAL ILLLLCGIVL YEGRIDARDR
SRSMQQNLAL MASWDIERNI EIYSLSLQAV VEGENDPEVV KLPMPLRRQV LFDRATTAKY
LGGIYVLDAK GDISVDGKSD VPRRANFGNE PYFTVHRDHA DVGLYVSPPY HSRLRGGSPS
IALSRRITRP DGSFGGVAVM SIRLEYFQNL FSRLSLGDRG SVALINTDGR MVAREPYDPK
IVGRDISRAS TFRQFMTANE GSFADTASID GVRRLYVFRH LDGLPLIVMV ARSEADTYAA
WYDRAIPIGS AMVLLAIGFV GLSLLLDVQL RKRHRAETEL QALARTDGLT GLDNRRMLDV
TLAREWRRAA RSQHALSLLF IDVDYFKHYN DTQGHQAGDD ALAAVGHCIA GCLRRPADYA
ARYGGEEFVV VLPDIDTDGA VTIAETIRTG ILDLGIRHDA GTVGRLTVSI GVTTSYPERD
DNIQAALKLA DEALYRAKEG GRNRIVVQAA TSPDDLESRQ A
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