Gene Bcenmc03_4561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4561 
Symbol 
ID6127383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1549475 
End bp1550113 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content67% 
IMG OID641651658 
ProductTetR family transcriptional regulator 
Protein accessionYP_001778191 
Protein GI170736931 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.286179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0846577 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACA GGACCAAGGC AGGGATCAGG ACAGGGAAAG ACGACGGGGC GGCGGGCAAG 
CCGCGCACGA AGCCGGCGGA AGTCCGCCTC GAAGAGCTGA TGGCCGCGGC CGAGACGCTG
TTCCTCGCGC AGGGCGTCGA GGCGACGACC ATCAGCGAGA TCGTCGAGCA CGCGCAGGTC
GCGAAGGGCA CGTTCTATCA CTACTTCGAA TCGAAGGCCG ACATGCTCGC GGCGCTCGCA
CAGCGCTACA CGGCATCCTT CCTCGACCAG TTGCAGCACG CGGTGAACGG GTGCGACGCC
GACGACTGGC TCGCGCGCCT GCGTGCGTGG ATCCGCGCCA GCATCGAGAT CTACGCGGCG
ACTTATCGCA CGCACGACAT CGTCTACACG AACCATCATC ACCACGATCG CGAGAATGCC
GACAAGAACG CGATCCTCGA GCAGCTCGGT GCGATTCTCG ACGGTGGCGT CCGGGCCGGC
GCCTGGCGGC TCGCGCACCC GCCAGTCACC GCGCTGCTGA TCTACGCCGG CGTGCACGGC
GCGACCGACC ACATCATCGC GTCGCCGGAA ACGGATCGCG TCGCGTTCGT CGATGCGGTG
GTCGACGATT GCCTGCGGAT GCTCGGCGTC GGCACATAG
 
Protein sequence
MTDRTKAGIR TGKDDGAAGK PRTKPAEVRL EELMAAAETL FLAQGVEATT ISEIVEHAQV 
AKGTFYHYFE SKADMLAALA QRYTASFLDQ LQHAVNGCDA DDWLARLRAW IRASIEIYAA
TYRTHDIVYT NHHHHDRENA DKNAILEQLG AILDGGVRAG AWRLAHPPVT ALLIYAGVHG
ATDHIIASPE TDRVAFVDAV VDDCLRMLGV GT